RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 SMIM13P0DJ93 91 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 KRTAP21-3Q3LHN1 58 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 Q6ZTC4 211 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 TENM3Q9P273 2699 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 LITAFQ99732 161 aa9.23□□□□□ -0.93
TMEM50B-201ENST00000420455 IGLV4-60A0A075B6I1 120 aa9.22□□□□□ -0.93
TMEM50B-201ENST00000420455 GAGE6Q13070 117 aa9.22□□□□□ -0.93
TMEM50B-201ENST00000420455 A0A1W2PPM0 123 aa9.21□□□□□ -0.93
TMEM50B-201ENST00000420455 HERVK_113P63121 156 aa9.21□□□□□ -0.93
TMEM50B-201ENST00000420455 C11orf45Q8TAV5 145 aa9.21□□□□□ -0.93
TMEM50B-201ENST00000420455 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.93
TMEM50B-201ENST00000420455 NOTCH1P46531 2555 aa9.21□□□□□ -0.94
TMEM50B-201ENST00000420455 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
TMEM50B-201ENST00000420455 LELP1Q5T871 98 aa9.21□□□□□ -0.94
TMEM50B-201ENST00000420455 IGLV5-39A0A0G2JS06 123 aa9.2□□□□□ -0.94
TMEM50B-201ENST00000420455 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
TMEM50B-201ENST00000420455 TRAV13-1A0A0B4J241 112 aa9.2□□□□□ -0.94
TMEM50B-201ENST00000420455 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
TMEM50B-201ENST00000420455 DNHD1Q96M86 4753 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 IGLL5B9A064 214 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 NANOS2P60321 138 aaKnown RBP9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 SRSF9Q13242 221 aaKnown RBP eCLIP9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 DEFB121Q5J5C9 76 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 HTN3P15516 51 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 RBX1P62877 108 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
TMEM50B-201ENST00000420455 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
TMEM50B-201ENST00000420455 K7EP34 96 aa9.18□□□□□ -0.94
TMEM50B-201ENST00000420455 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
TMEM50B-201ENST00000420455 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
TMEM50B-201ENST00000420455 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
TMEM50B-201ENST00000420455 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
TMEM50B-201ENST00000420455 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
TMEM50B-201ENST00000420455 CFC1P0CG37 223 aa9.16□□□□□ -0.94
TMEM50B-201ENST00000420455 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
TMEM50B-201ENST00000420455 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
TMEM50B-201ENST00000420455 MGAM2Q2M2H8 2515 aa9.15□□□□□ -0.94
TMEM50B-201ENST00000420455 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
TMEM50B-201ENST00000420455 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.95
TMEM50B-201ENST00000420455 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.95
TMEM50B-201ENST00000420455 NDUFA1O15239 70 aa9.15□□□□□ -0.95
TMEM50B-201ENST00000420455 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
TMEM50B-201ENST00000420455 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
TMEM50B-201ENST00000420455 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
TMEM50B-201ENST00000420455 DNAH1Q9P2D7 4330 aa9.14□□□□□ -0.95
TMEM50B-201ENST00000420455 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 A6NJY4 79 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 FABP2P12104 132 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 COL7A1Q02388 2944 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 A4D1N5 150 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 TSPAN13O95857 204 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 Q8N3U1 123 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
TMEM50B-201ENST00000420455 A0A087WZ39 114 aa9.12□□□□□ -0.95
TMEM50B-201ENST00000420455 APOMO95445 188 aa9.12□□□□□ -0.95
TMEM50B-201ENST00000420455 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 IGKV3OR2-268A0A0C4DH90 116 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 MIAQ16674 131 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 ESRGQ1W209 222 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 Q9H8V8 135 aa9.11□□□□□ -0.95
TMEM50B-201ENST00000420455 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
TMEM50B-201ENST00000420455 TIMM17BO60830 172 aa9.1□□□□□ -0.95
TMEM50B-201ENST00000420455 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
TMEM50B-201ENST00000420455 DAND5Q8N907 189 aa9.1□□□□□ -0.95
TMEM50B-201ENST00000420455 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
TMEM50B-201ENST00000420455 SS18Q15532 418 aa9.09□□□□□ -0.95
TMEM50B-201ENST00000420455 REG3AQ06141 175 aa9.09□□□□□ -0.95
TMEM50B-201ENST00000420455 A0A0B4J2C4 111 aa9.08□□□□□ -0.96
TMEM50B-201ENST00000420455 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
TMEM50B-201ENST00000420455 ANGP03950 147 aaKnown RBP9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 CD164L2Q6UWJ8 174 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 NPC2P61916 151 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
TMEM50B-201ENST00000420455 CLPSL2Q6UWE3 100 aa9.06□□□□□ -0.96
TMEM50B-201ENST00000420455 IGHV3-33P01772 117 aa9.06□□□□□ -0.96
TMEM50B-201ENST00000420455 H3BMG7 143 aa9.06□□□□□ -0.96
TMEM50B-201ENST00000420455 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
TMEM50B-201ENST00000420455 PRSS2P07478 247 aa9.05□□□□□ -0.96
TMEM50B-201ENST00000420455 FOXI1Q12951 378 aa9.05□□□□□ -0.96
TMEM50B-201ENST00000420455 SOSTDC1Q6X4U4 206 aa9.05□□□□□ -0.96
TMEM50B-201ENST00000420455 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms