RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SMIM13P0DJ93 91 aa11.61□□□□□ -0.55
SSBP3-205ENST00000417664 MDFIQ99750 246 aa11.61□□□□□ -0.55
SSBP3-205ENST00000417664 TM2D3Q9BRN9 247 aa11.61□□□□□ -0.55
SSBP3-205ENST00000417664 A0A0J9YWU9 116 aa11.6□□□□□ -0.55
SSBP3-205ENST00000417664 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SSBP3-205ENST00000417664 TMEM238C9JI98 176 aa11.6□□□□□ -0.55
SSBP3-205ENST00000417664 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
SSBP3-205ENST00000417664 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
SSBP3-205ENST00000417664 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
SSBP3-205ENST00000417664 Q6ZTC4 211 aa11.59□□□□□ -0.55
SSBP3-205ENST00000417664 C11orf45Q8TAV5 145 aa11.59□□□□□ -0.55
SSBP3-205ENST00000417664 A0A1B0GWB2 263 aa11.58□□□□□ -0.56
SSBP3-205ENST00000417664 NDUFA1O15239 70 aa11.58□□□□□ -0.56
SSBP3-205ENST00000417664 SS18Q15532 418 aa11.58□□□□□ -0.56
SSBP3-205ENST00000417664 Q6ZVH6 145 aa11.58□□□□□ -0.56
SSBP3-205ENST00000417664 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
SSBP3-205ENST00000417664 C9orf118A6NHY6 69 aa11.57□□□□□ -0.56
SSBP3-205ENST00000417664 TIMM17BO60830 172 aa11.57□□□□□ -0.56
SSBP3-205ENST00000417664 NHP2Q9NX24 153 aaKnown RBP11.57□□□□□ -0.56
SSBP3-205ENST00000417664 K7EP13 123 aa11.56□□□□□ -0.56
SSBP3-205ENST00000417664 IGHV3-30P01768 117 aa11.56□□□□□ -0.56
SSBP3-205ENST00000417664 IGHV3-30-5P0DP03 117 aa11.56□□□□□ -0.56
SSBP3-205ENST00000417664 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
SSBP3-205ENST00000417664 A0A087WZ39 114 aa11.55□□□□□ -0.56
SSBP3-205ENST00000417664 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
SSBP3-205ENST00000417664 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-205ENST00000417664 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
SSBP3-205ENST00000417664 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
SSBP3-205ENST00000417664 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
SSBP3-205ENST00000417664 HERV-K104P63124 156 aa11.54□□□□□ -0.56
SSBP3-205ENST00000417664 SPANXDQ9BXN6 97 aa11.54□□□□□ -0.56
SSBP3-205ENST00000417664 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
SSBP3-205ENST00000417664 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
SSBP3-205ENST00000417664 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
SSBP3-205ENST00000417664 ANGP03950 147 aaKnown RBP11.52□□□□□ -0.56
SSBP3-205ENST00000417664 NANOS2P60321 138 aaKnown RBP11.52□□□□□ -0.56
SSBP3-205ENST00000417664 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.56
SSBP3-205ENST00000417664 LITAFQ99732 161 aa11.52□□□□□ -0.56
SSBP3-205ENST00000417664 VAMP3Q15836 100 aa11.52□□□□□ -0.57
SSBP3-205ENST00000417664 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
SSBP3-205ENST00000417664 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.57
SSBP3-205ENST00000417664 RAB37Q96AX2 223 aa11.52□□□□□ -0.57
SSBP3-205ENST00000417664 ZNF625Q96I27 306 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-205ENST00000417664 Q9H8V8 135 aa11.52□□□□□ -0.57
SSBP3-205ENST00000417664 REG3AQ06141 175 aa11.51□□□□□ -0.57
SSBP3-205ENST00000417664 COX7B2Q8TF08 81 aa11.5□□□□□ -0.57
SSBP3-205ENST00000417664 NBEAL1Q6ZS30 2694 aa11.5□□□□□ -0.57
SSBP3-205ENST00000417664 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 H3BUT2 72 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 K7ERJ3 54 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 IFITM1P13164 125 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 MIAQ16674 131 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 CD164L2Q6UWJ8 174 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
SSBP3-205ENST00000417664 MGAM2Q2M2H8 2515 aa11.48□□□□□ -0.57
SSBP3-205ENST00000417664 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-205ENST00000417664 XCL1P47992 114 aa11.48□□□□□ -0.57
SSBP3-205ENST00000417664 MUSTN1Q8IVN3 82 aa11.48□□□□□ -0.57
SSBP3-205ENST00000417664 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
SSBP3-205ENST00000417664 A0A1W2PPM0 123 aa11.47□□□□□ -0.57
SSBP3-205ENST00000417664 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
SSBP3-205ENST00000417664 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
SSBP3-205ENST00000417664 IGLL5B9A064 214 aa11.46□□□□□ -0.57
SSBP3-205ENST00000417664 FABP2P12104 132 aa11.46□□□□□ -0.57
SSBP3-205ENST00000417664 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.57
SSBP3-205ENST00000417664 CHCHD10Q8WYQ3 142 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-205ENST00000417664 PRSS2P07478 247 aa11.46□□□□□ -0.58
SSBP3-205ENST00000417664 CLPSL2Q6UWE3 100 aa11.46□□□□□ -0.58
SSBP3-205ENST00000417664 GTF2H5Q6ZYL4 71 aa11.46□□□□□ -0.58
SSBP3-205ENST00000417664 PPDPFQ9H3Y8 114 aa11.46□□□□□ -0.58
SSBP3-205ENST00000417664 A0A0B4J2C4 111 aa11.45□□□□□ -0.58
SSBP3-205ENST00000417664 A4D1N5 150 aa11.45□□□□□ -0.58
SSBP3-205ENST00000417664 COX7A2LO14548 114 aa11.45□□□□□ -0.58
SSBP3-205ENST00000417664 CFC1BP0CG36 223 aa11.45□□□□□ -0.58
SSBP3-205ENST00000417664 CFC1P0CG37 223 aa11.45□□□□□ -0.58
SSBP3-205ENST00000417664 TENM3Q9P273 2699 aa11.44□□□□□ -0.58
SSBP3-205ENST00000417664 Q8IZM0 81 aa11.44□□□□□ -0.58
SSBP3-205ENST00000417664 Q8N3U1 123 aa11.44□□□□□ -0.58
SSBP3-205ENST00000417664 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
SSBP3-205ENST00000417664 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 APOMO95445 188 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 ESRGQ1W209 222 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 PRO1854Q9UHT4 67 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
SSBP3-205ENST00000417664 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
SSBP3-205ENST00000417664 B9D2Q9BPU9 175 aa11.42□□□□□ -0.58
SSBP3-205ENST00000417664 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
SSBP3-205ENST00000417664 K7EP34 96 aa11.41□□□□□ -0.58
SSBP3-205ENST00000417664 CRPP02741 224 aa11.41□□□□□ -0.58
SSBP3-205ENST00000417664 CXCL5P42830 114 aa11.41□□□□□ -0.58
SSBP3-205ENST00000417664 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
SSBP3-205ENST00000417664 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
SSBP3-205ENST00000417664 MALP21145 153 aa11.4□□□□□ -0.58
SSBP3-205ENST00000417664 FOXI1Q12951 378 aa11.4□□□□□ -0.58
SSBP3-205ENST00000417664 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.58
SSBP3-205ENST00000417664 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms