RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	HIST1H2BH	Q93079	126 aa		10.63	□□□□□ -0.71
DDR1-231	ENST00000417521	CHCHD1	Q96BP2	118 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-231	ENST00000417521	HIST1H2BN	Q99877	126 aa		10.63	□□□□□ -0.71
DDR1-231	ENST00000417521	HIST1H2BM	Q99879	126 aa		10.63	□□□□□ -0.71
DDR1-231	ENST00000417521	INAFM2	P0DMQ5	153 aa		10.62	□□□□□ -0.71
DDR1-231	ENST00000417521	LINC00310	P59036	64 aa		10.62	□□□□□ -0.71
DDR1-231	ENST00000417521	SCGB3A1	Q96QR1	104 aa		10.62	□□□□□ -0.71
DDR1-231	ENST00000417521	TRAV13-1	A0A0B4J241	112 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	SERF1A	O75920	110 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	HBD	P02042	147 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	ZC2HC1B	Q5TFG8	222 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	TMEM141	Q96I45	108 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	CHAC1	Q9BUX1	264 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	ERAS	Q7Z444	233 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	C9orf163	Q8N9P6	203 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	TIMM17A	Q99595	171 aa		10.61	□□□□□ -0.71
DDR1-231	ENST00000417521	GAGE12H	A6NDE8	117 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	C1orf196	B1AJZ1	125 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	CCL25	O15444	150 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	NUPR1	O60356	82 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	HSBP1	O75506	76 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	XCL1	P47992	114 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	SS18	Q15532	418 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	SCX	Q7RTU7	201 aa		10.6	□□□□□ -0.71
DDR1-231	ENST00000417521	IFITM10	A6NMD0	228 aa		10.59	□□□□□ -0.71
DDR1-231	ENST00000417521		Q6ZN92	141 aa		10.59	□□□□□ -0.71
DDR1-231	ENST00000417521	LINC00173	Q6ZV60	143 aa		10.59	□□□□□ -0.71
DDR1-231	ENST00000417521	FAM19A2	Q8N3H0	131 aa		10.59	□□□□□ -0.71
DDR1-231	ENST00000417521	SRRM2	Q9UQ35	2752 aa	Known RBP	10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	LINC01549	A6NIU2	74 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	NPS	P0C0P6	89 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	CNBP	P62633	177 aa	Known RBP	10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	PDZD11	Q5EBL8	140 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	TEX43	Q6ZNM6	134 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	AMELX	Q99217	191 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	VCX2	Q9H322	139 aa		10.58	□□□□□ -0.72
DDR1-231	ENST00000417521	hDV102S1	A0JD36	115 aa		10.57	□□□□□ -0.72
DDR1-231	ENST00000417521	CFAP161	Q6P656	301 aa		10.57	□□□□□ -0.72
DDR1-231	ENST00000417521	CIRBP-AS1	Q8TBR5	109 aa		10.57	□□□□□ -0.72
DDR1-231	ENST00000417521	PLA2G1B	P04054	148 aa	Known RBP	10.56	□□□□□ -0.72
DDR1-231	ENST00000417521	FOXI1	Q12951	378 aa		10.56	□□□□□ -0.72
DDR1-231	ENST00000417521	LINC00528	Q8N1L1	170 aa		10.56	□□□□□ -0.72
DDR1-231	ENST00000417521	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	PAPPA-AS1	Q5QFB9	102 aa		10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	SDIM1	Q6ZPB5	146 aa		10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	C2orf88	Q9BSF0	95 aa		10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	UBE2D1	P51668	147 aa		10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	CD164L2	Q6UWJ8	174 aa		10.55	□□□□□ -0.72
DDR1-231	ENST00000417521	C15orf56	Q8N910	161 aa		10.54	□□□□□ -0.72
DDR1-231	ENST00000417521	ATP5L	O75964	103 aa		10.53	□□□□□ -0.72
DDR1-231	ENST00000417521	SLPI	P03973	132 aa		10.53	□□□□□ -0.72
DDR1-231	ENST00000417521	NDUFA6	P56556	154 aa		10.53	□□□□□ -0.72
DDR1-231	ENST00000417521	LINC00242	Q5T6M2	205 aa		10.53	□□□□□ -0.72
DDR1-231	ENST00000417521	CST9L	Q9H4G1	147 aa		10.53	□□□□□ -0.72
DDR1-231	ENST00000417521	COX6A2	Q02221	97 aa		10.52	□□□□□ -0.73
DDR1-231	ENST00000417521	PMVK	Q15126	192 aa		10.52	□□□□□ -0.73
DDR1-231	ENST00000417521	MYCBP2	O75592	4640 aa		10.51	□□□□□ -0.73
DDR1-231	ENST00000417521	C5orf38	Q86SI9	138 aa		10.51	□□□□□ -0.73
DDR1-231	ENST00000417521	IGHV3-64	A0A075B6Q5	118 aa		10.5	□□□□□ -0.73
DDR1-231	ENST00000417521	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.5	□□□□□ -0.73
DDR1-231	ENST00000417521		A0A0J9YXV3	536 aa		10.5	□□□□□ -0.73
DDR1-231	ENST00000417521	COA6	Q5JTJ3	125 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-231	ENST00000417521	IFI27L1	Q96BM0	104 aa		10.5	□□□□□ -0.73
DDR1-231	ENST00000417521	COX7A2L	O14548	114 aa		10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	LEPROTL1	O95214	131 aa		10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	FABP4	P15090	132 aa		10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	CIRBP	Q14011	172 aa	Known RBP	10.49	□□□□□ -0.73
DDR1-231	ENST00000417521	PANO1	I0J062	215 aa		10.48	□□□□□ -0.73
DDR1-231	ENST00000417521	HIGD2B	Q4VC39	106 aa		10.48	□□□□□ -0.73
DDR1-231	ENST00000417521	FAM19A3	Q7Z5A8	133 aa		10.48	□□□□□ -0.73
DDR1-231	ENST00000417521	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-231	ENST00000417521	FLG2	Q5D862	2391 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-231	ENST00000417521	IGHV1-58	A0A0C4DH39	117 aa		10.47	□□□□□ -0.73
DDR1-231	ENST00000417521	MAL	P21145	153 aa		10.47	□□□□□ -0.73
DDR1-231	ENST00000417521	KRTAP10-4	P60372	401 aa	Predicted RBP	10.46	□□□□□ -0.74
DDR1-231	ENST00000417521	GEMIN7	Q9H840	131 aa	Known RBP	10.46	□□□□□ -0.74
DDR1-231	ENST00000417521	TINCR	A0A1B0GVN0	87 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521		H0Y8G0	127 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	S100A6	P06703	90 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	SEC11A	P67812	179 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	LINC00526	Q96FQ7	95 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	CDKN2A-AS1	Q9UH64	79 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	HSPB8	Q9UJY1	196 aa		10.45	□□□□□ -0.74
DDR1-231	ENST00000417521	IGLV4-69	A0A075B6H9	119 aa		10.44	□□□□□ -0.74
DDR1-231	ENST00000417521		A0A087WZ39	114 aa		10.44	□□□□□ -0.74
DDR1-231	ENST00000417521	HERVK_113	P63121	156 aa		10.44	□□□□□ -0.74
DDR1-231	ENST00000417521	TRAV12-1	A0A0B4J245	112 aa		10.43	□□□□□ -0.74
DDR1-231	ENST00000417521	IGLC3	P0DOY3	106 aa		10.43	□□□□□ -0.74
DDR1-231	ENST00000417521	DPH3	Q96FX2	82 aa		10.43	□□□□□ -0.74
DDR1-231	ENST00000417521	LINC00469	Q8N7U9	141 aa		10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	SPACA4	Q8TDM5	124 aa		10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	IGLV5-45	A0A087WSX0	123 aa		10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	APOM	O95445	188 aa		10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	ORAOV1	Q8WV07	137 aa		10.42	□□□□□ -0.74
DDR1-231	ENST00000417521	MRPL35	Q9NZE8	188 aa	Known RBP	10.42	□□□□□ -0.74

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