RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
RUFY3-203ENST00000417478 SPANXB1Q9NS25 103 aaPredicted RBP13.93□□□□□ -0.18
RUFY3-203ENST00000417478 GAGE6Q13070 117 aa13.92□□□□□ -0.18
RUFY3-203ENST00000417478 CHCHD5Q9BSY4 110 aa13.92□□□□□ -0.18
RUFY3-203ENST00000417478 CDKN2A-AS1Q9UH64 79 aa13.91□□□□□ -0.18
RUFY3-203ENST00000417478 TRAV8-3A0A0A6YYJ7 113 aa13.91□□□□□ -0.18
RUFY3-203ENST00000417478 C9orf118A6NHY6 69 aa13.91□□□□□ -0.18
RUFY3-203ENST00000417478 SRSF9Q13242 221 aaKnown RBP eCLIP13.91□□□□□ -0.18
RUFY3-203ENST00000417478 SPINK8P0C7L1 97 aa13.9□□□□□ -0.18
RUFY3-203ENST00000417478 NHP2Q9NX24 153 aaKnown RBP13.9□□□□□ -0.18
RUFY3-203ENST00000417478 A0A096LPF7 62 aa13.9□□□□□ -0.18
RUFY3-203ENST00000417478 TRAV13-1A0A0B4J241 112 aa13.9□□□□□ -0.18
RUFY3-203ENST00000417478 TGP01266 2768 aa13.89□□□□□ -0.19
RUFY3-203ENST00000417478 NHLRC4P0CG21 123 aaPredicted RBP13.89□□□□□ -0.19
RUFY3-203ENST00000417478 COX6A2Q02221 97 aa13.89□□□□□ -0.19
RUFY3-203ENST00000417478 VAMP3Q15836 100 aa13.89□□□□□ -0.19
RUFY3-203ENST00000417478 DEFB131BA0A096LNP1 70 aa13.88□□□□□ -0.19
RUFY3-203ENST00000417478 RAB37Q96AX2 223 aa13.88□□□□□ -0.19
RUFY3-203ENST00000417478 TMEM238LA0A1B0GVL6 79 aa13.87□□□□□ -0.19
RUFY3-203ENST00000417478 A6NJY4 79 aa13.87□□□□□ -0.19
RUFY3-203ENST00000417478 UBE2V1Q13404 147 aa13.87□□□□□ -0.19
RUFY3-203ENST00000417478 C10orf126Q8N4M7 172 aa13.87□□□□□ -0.19
RUFY3-203ENST00000417478 A0A1B0GWB2 263 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 NDUFA12Q9UI09 145 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 IGLV4-60A0A075B6I1 120 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 A0A0J9YXY3 114 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 K7ERJ3 54 aa13.85□□□□□ -0.19
RUFY3-203ENST00000417478 TMEM238C9JI98 176 aa13.84□□□□□ -0.19
RUFY3-203ENST00000417478 H3BUT2 72 aa13.84□□□□□ -0.19
RUFY3-203ENST00000417478 IGHV3-30P01768 117 aa13.84□□□□□ -0.19
RUFY3-203ENST00000417478 IGHV3-30-5P0DP03 117 aa13.84□□□□□ -0.19
RUFY3-203ENST00000417478 A0A1B0GUV1 79 aa13.83□□□□□ -0.2
RUFY3-203ENST00000417478 CSMD3Q7Z407 3707 aa13.83□□□□□ -0.2
RUFY3-203ENST00000417478 SMIM1B2RUZ4 78 aa13.82□□□□□ -0.2
RUFY3-203ENST00000417478 DNAH7Q8WXX0 4024 aa13.82□□□□□ -0.2
RUFY3-203ENST00000417478 TRAV10A0A0B4J240 114 aa13.81□□□□□ -0.2
RUFY3-203ENST00000417478 MRPL23Q16540 153 aaKnown RBP13.81□□□□□ -0.2
RUFY3-203ENST00000417478 SH2D6Q7Z4S9 175 aa13.81□□□□□ -0.2
RUFY3-203ENST00000417478 ICOSQ9Y6W8 199 aa13.81□□□□□ -0.2
RUFY3-203ENST00000417478 CCL25O15444 150 aa13.81□□□□□ -0.2
RUFY3-203ENST00000417478 TMEM262E9PQX1 116 aa13.8□□□□□ -0.2
RUFY3-203ENST00000417478 NDUFA1O15239 70 aa13.8□□□□□ -0.2
RUFY3-203ENST00000417478 A0A1W2PPM0 123 aa13.79□□□□□ -0.2
RUFY3-203ENST00000417478 RBX1P62877 108 aa13.79□□□□□ -0.2
RUFY3-203ENST00000417478 NAA38Q9BRA0 125 aaKnown RBP13.79□□□□□ -0.2
RUFY3-203ENST00000417478 H3BNG1 76 aa13.78□□□□□ -0.2
RUFY3-203ENST00000417478 LITAFQ99732 161 aa13.78□□□□□ -0.2
RUFY3-203ENST00000417478 IGKV3OR2-268A0A0C4DH90 116 aa13.77□□□□□ -0.21
RUFY3-203ENST00000417478 IGLL5B9A064 214 aa13.77□□□□□ -0.21
RUFY3-203ENST00000417478 TIMM17BO60830 172 aa13.77□□□□□ -0.21
RUFY3-203ENST00000417478 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.21
RUFY3-203ENST00000417478 FABP2P12104 132 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 GTF2H5Q6ZYL4 71 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 TENM2Q9NT68 2774 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 SPANXDQ9BXN6 97 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 SPANXCQ9NY87 97 aa13.76□□□□□ -0.21
RUFY3-203ENST00000417478 LINC00959A0A1B0GUT2 108 aa13.75□□□□□ -0.21
RUFY3-203ENST00000417478 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
RUFY3-203ENST00000417478 K7EP34 96 aa13.75□□□□□ -0.21
RUFY3-203ENST00000417478 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
RUFY3-203ENST00000417478 MUSTN1Q8IVN3 82 aa13.74□□□□□ -0.21
RUFY3-203ENST00000417478 LELP1Q5T871 98 aa13.73□□□□□ -0.21
RUFY3-203ENST00000417478 Q9H8V8 135 aa13.73□□□□□ -0.21
RUFY3-203ENST00000417478 SS18Q15532 418 aa13.73□□□□□ -0.21
RUFY3-203ENST00000417478 LYPD5Q6UWN5 251 aa13.73□□□□□ -0.21
RUFY3-203ENST00000417478 SPCS1Q9Y6A9 102 aa13.73□□□□□ -0.21
RUFY3-203ENST00000417478 APOMO95445 188 aa13.72□□□□□ -0.21
RUFY3-203ENST00000417478 MIAQ16674 131 aa13.72□□□□□ -0.21
RUFY3-203ENST00000417478 STARD9Q9P2P6 4700 aa13.72□□□□□ -0.21
RUFY3-203ENST00000417478 A4D1N5 150 aa13.72□□□□□ -0.21
RUFY3-203ENST00000417478 CIRBPQ14011 172 aaKnown RBP13.72□□□□□ -0.21
RUFY3-203ENST00000417478 ADAMTSL4-AS1Q5T5F5 129 aa13.72□□□□□ -0.21
RUFY3-203ENST00000417478 A0A087WZ39 114 aa13.71□□□□□ -0.21
RUFY3-203ENST00000417478 CFC1BP0CG36 223 aa13.71□□□□□ -0.21
RUFY3-203ENST00000417478 CFC1P0CG37 223 aa13.71□□□□□ -0.21
RUFY3-203ENST00000417478 ZNF625Q96I27 306 aaPredicted RBP13.71□□□□□ -0.21
RUFY3-203ENST00000417478 LYSTQ99698 3801 aa13.71□□□□□ -0.21
RUFY3-203ENST00000417478 PLECQ15149 4684 aaKnown RBP13.71□□□□□ -0.22
RUFY3-203ENST00000417478 HERV-K104P63124 156 aa13.7□□□□□ -0.22
RUFY3-203ENST00000417478 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
RUFY3-203ENST00000417478 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.7□□□□□ -0.22
RUFY3-203ENST00000417478 ESRGQ1W209 222 aa13.69□□□□□ -0.22
RUFY3-203ENST00000417478 COX7B2Q8TF08 81 aa13.69□□□□□ -0.22
RUFY3-203ENST00000417478 PRSS2P07478 247 aa13.69□□□□□ -0.22
RUFY3-203ENST00000417478 IFITM1P13164 125 aa13.69□□□□□ -0.22
RUFY3-203ENST00000417478 A0A0B4J2C4 111 aa13.68□□□□□ -0.22
RUFY3-203ENST00000417478 Q8N3U1 123 aa13.68□□□□□ -0.22
RUFY3-203ENST00000417478 LINC00269Q8N2A0 174 aa13.67□□□□□ -0.22
RUFY3-203ENST00000417478 C15orf53Q8NAA6 179 aa13.67□□□□□ -0.22
RUFY3-203ENST00000417478 PRO1854Q9UHT4 67 aa13.67□□□□□ -0.22
RUFY3-203ENST00000417478 TSPAN13O95857 204 aa13.66□□□□□ -0.22
RUFY3-203ENST00000417478 ANGP03950 147 aaKnown RBP13.66□□□□□ -0.22
RUFY3-203ENST00000417478 CLPSL2Q6UWE3 100 aa13.66□□□□□ -0.22
RUFY3-203ENST00000417478 LINC01561Q8N1V8 128 aa13.66□□□□□ -0.22
RUFY3-203ENST00000417478 XCL1P47992 114 aa13.66□□□□□ -0.22
RUFY3-203ENST00000417478 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
RUFY3-203ENST00000417478 REG3AQ06141 175 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms