RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
ACTB-203ENST00000417101 FAM104AQ969W3 186 aa13.43□□□□□ -0.26
ACTB-203ENST00000417101 RNF213Q63HN8 5207 aa13.43□□□□□ -0.26
ACTB-203ENST00000417101 PEA15Q15121 130 aa13.42□□□□□ -0.26
ACTB-203ENST00000417101 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
ACTB-203ENST00000417101 SPANXA1Q9NS26 97 aa13.42□□□□□ -0.26
ACTB-203ENST00000417101 HBBP68871 147 aa13.41□□□□□ -0.26
ACTB-203ENST00000417101 RNF151Q2KHN1 245 aa13.41□□□□□ -0.26
ACTB-203ENST00000417101 PSORS1C2Q9UIG4 136 aa13.41□□□□□ -0.26
ACTB-203ENST00000417101 IGHV3OR16-9A0A0B4J2B5 98 aa13.4□□□□□ -0.26
ACTB-203ENST00000417101 F8W036 122 aa13.4□□□□□ -0.26
ACTB-203ENST00000417101 NPYP01303 97 aa13.4□□□□□ -0.26
ACTB-203ENST00000417101 MT-ND6P03923 174 aa13.4□□□□□ -0.26
ACTB-203ENST00000417101 S100A8P05109 93 aa13.4□□□□□ -0.26
ACTB-203ENST00000417101 A0A1B0GVG6 124 aa13.39□□□□□ -0.27
ACTB-203ENST00000417101 MRPS36P82909 103 aaKnown RBP13.39□□□□□ -0.27
ACTB-203ENST00000417101 PHF5AQ7RTV0 110 aaKnown RBP13.39□□□□□ -0.27
ACTB-203ENST00000417101 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
ACTB-203ENST00000417101 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
ACTB-203ENST00000417101 MRPL35Q9NZE8 188 aaKnown RBP13.38□□□□□ -0.27
ACTB-203ENST00000417101 SMDT1Q9H4I9 107 aa13.37□□□□□ -0.27
ACTB-203ENST00000417101 F8WDY8 70 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 NDUFA1O15239 70 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 PPBPP02775 128 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 C1orf137Q5JT78 98 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 C10orf25Q5T742 122 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 IMMP2LQ96T52 175 aa13.36□□□□□ -0.27
ACTB-203ENST00000417101 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
ACTB-203ENST00000417101 RAB5AP20339 215 aa13.33□□□□□ -0.28
ACTB-203ENST00000417101 ORMDL3Q8N138 153 aa13.33□□□□□ -0.28
ACTB-203ENST00000417101 TGIF2-C20orf24A0A0A6YYL0 155 aa13.32□□□□□ -0.28
ACTB-203ENST00000417101 FAM168BA1KXE4 195 aa13.32□□□□□ -0.28
ACTB-203ENST00000417101 IFI27P40305 119 aaPredicted RBP13.32□□□□□ -0.28
ACTB-203ENST00000417101 TMEM136Q6ZRR5 245 aa13.32□□□□□ -0.28
ACTB-203ENST00000417101 PRELID3AQ96N28 172 aa13.32□□□□□ -0.28
ACTB-203ENST00000417101 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
ACTB-203ENST00000417101 ATP5L2Q7Z4Y8 100 aa13.31□□□□□ -0.28
ACTB-203ENST00000417101 TLX1NBP0CAT3 122 aa13.3□□□□□ -0.28
ACTB-203ENST00000417101 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
ACTB-203ENST00000417101 A0A087WZ39 114 aa13.29□□□□□ -0.28
ACTB-203ENST00000417101 GAGE2EQ4V326 116 aa13.29□□□□□ -0.28
ACTB-203ENST00000417101 FAM19A5Q7Z5A7 132 aaPredicted RBP13.29□□□□□ -0.28
ACTB-203ENST00000417101 GAGE2DQ9UEU5 116 aa13.29□□□□□ -0.28
ACTB-203ENST00000417101 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
ACTB-203ENST00000417101 IGLV7-43P04211 117 aa13.28□□□□□ -0.28
ACTB-203ENST00000417101 KIAA0087Q14695 138 aa13.28□□□□□ -0.28
ACTB-203ENST00000417101 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
ACTB-203ENST00000417101 KRTAP11-1Q8IUC1 163 aa13.28□□□□□ -0.28
ACTB-203ENST00000417101 LOC389332A0A1B0GUA5 103 aa13.27□□□□□ -0.29
ACTB-203ENST00000417101 TMEM141Q96I45 108 aa13.27□□□□□ -0.29
ACTB-203ENST00000417101 DIRC1Q969H9 104 aa13.26□□□□□ -0.29
ACTB-203ENST00000417101 C2orf82Q6UX34 121 aa13.25□□□□□ -0.29
ACTB-203ENST00000417101 TEX43Q6ZNM6 134 aa13.24□□□□□ -0.29
ACTB-203ENST00000417101 KRTAP7-1Q8IUC3 87 aa13.24□□□□□ -0.29
ACTB-203ENST00000417101 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
ACTB-203ENST00000417101 PRSS47A8MTI9 375 aa13.23□□□□□ -0.29
ACTB-203ENST00000417101 UBE2D1P51668 147 aa13.23□□□□□ -0.29
ACTB-203ENST00000417101 PRR26Q8N8Z3 221 aa13.23□□□□□ -0.29
ACTB-203ENST00000417101 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
ACTB-203ENST00000417101 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
ACTB-203ENST00000417101 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
ACTB-203ENST00000417101 NDUFC2-KCTD14E9PQ53 114 aa13.21□□□□□ -0.29
ACTB-203ENST00000417101 H0Y9J4 135 aa13.21□□□□□ -0.29
ACTB-203ENST00000417101 M0QXV9 152 aa13.21□□□□□ -0.29
ACTB-203ENST00000417101 PACRGQ96M98 296 aaPredicted RBP13.21□□□□□ -0.29
ACTB-203ENST00000417101 C2orf88Q9BSF0 95 aa13.21□□□□□ -0.29
ACTB-203ENST00000417101 CYSLTR1Q9Y271 337 aa13.21□□□□□ -0.29
ACTB-203ENST00000417101 LPAP08519 4548 aa13.2□□□□□ -0.3
ACTB-203ENST00000417101 UBE2BP63146 152 aa13.2□□□□□ -0.3
ACTB-203ENST00000417101 C2orf66Q6UXQ4 117 aa13.2□□□□□ -0.3
ACTB-203ENST00000417101 Q8N8P6 123 aa13.2□□□□□ -0.3
ACTB-203ENST00000417101 Q6ZN92 141 aa13.19□□□□□ -0.3
ACTB-203ENST00000417101 LINC00173Q6ZV60 143 aa13.19□□□□□ -0.3
ACTB-203ENST00000417101 LINC01561Q8N1V8 128 aa13.19□□□□□ -0.3
ACTB-203ENST00000417101 C9orf129Q5T035 196 aaKnown RBP13.18□□□□□ -0.3
ACTB-203ENST00000417101 VCX2Q9H322 139 aa13.18□□□□□ -0.3
ACTB-203ENST00000417101 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
ACTB-203ENST00000417101 PNRC1Q12796 327 aaPredicted RBP13.17□□□□□ -0.3
ACTB-203ENST00000417101 AMELXQ99217 191 aa13.17□□□□□ -0.3
ACTB-203ENST00000417101 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
ACTB-203ENST00000417101 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
ACTB-203ENST00000417101 TOMM7Q9P0U1 55 aa13.16□□□□□ -0.3
ACTB-203ENST00000417101 PRSS2P07478 247 aa13.15□□□□□ -0.3
ACTB-203ENST00000417101 CKS1BP61024 79 aa13.14□□□□□ -0.31
ACTB-203ENST00000417101 IGIPA6NJ69 53 aa13.13□□□□□ -0.31
ACTB-203ENST00000417101 KRTAP1-4P0C5Y4 121 aa13.13□□□□□ -0.31
ACTB-203ENST00000417101 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
ACTB-203ENST00000417101 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
ACTB-203ENST00000417101 K7EMI3 77 aa13.12□□□□□ -0.31
ACTB-203ENST00000417101 NPSP0C0P6 89 aa13.12□□□□□ -0.31
ACTB-203ENST00000417101 LINC00469Q8N7U9 141 aa13.12□□□□□ -0.31
ACTB-203ENST00000417101 Q8IZM0 81 aa13.11□□□□□ -0.31
ACTB-203ENST00000417101 ALKBH7Q9BT30 221 aaPredicted RBP13.11□□□□□ -0.31
ACTB-203ENST00000417101 NXT2Q9NPJ8 142 aaKnown RBP13.11□□□□□ -0.31
ACTB-203ENST00000417101 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
ACTB-203ENST00000417101 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
ACTB-203ENST00000417101 CDKN2A-AS1Q9UH64 79 aa13.09□□□□□ -0.31
ACTB-203ENST00000417101 RAB14P61106 215 aa13.08□□□□□ -0.32
ACTB-203ENST00000417101 HERVK_113P63121 156 aa13.08□□□□□ -0.32
ACTB-203ENST00000417101 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms