RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
SCARB1-203ENST00000415380 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
SCARB1-203ENST00000415380 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
SCARB1-203ENST00000415380 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
SCARB1-203ENST00000415380 COX7B2Q8TF08 81 aa12.71□□□□□ -0.37
SCARB1-203ENST00000415380 C22orf24Q9Y442 160 aa12.71□□□□□ -0.37
SCARB1-203ENST00000415380 HIST2H2BCQ6DN03 193 aa12.71□□□□□ -0.38
SCARB1-203ENST00000415380 LRRC75A-AS1Q8N1F1 130 aa12.71□□□□□ -0.38
SCARB1-203ENST00000415380 LRRK2Q5S007 2527 aa12.7□□□□□ -0.38
SCARB1-203ENST00000415380 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
SCARB1-203ENST00000415380 MIR7-3HGQ8N6C7 128 aa12.7□□□□□ -0.38
SCARB1-203ENST00000415380 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
SCARB1-203ENST00000415380 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
SCARB1-203ENST00000415380 ZNF469Q96JG9 3925 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-203ENST00000415380 SMCR5Q8TEV8 140 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 EPG5Q9HCE0 2579 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 IGKV3OR2-268A0A0C4DH90 116 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 KRTAP1-3Q8IUG1 177 aa12.69□□□□□ -0.38
SCARB1-203ENST00000415380 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 CRPP02741 224 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 PF4P02776 101 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
SCARB1-203ENST00000415380 LINC00337Q8N6G1 96 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 ZNF462Q96JM2 2506 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 RPL35AP18077 110 aaKnown RBP12.68□□□□□ -0.38
SCARB1-203ENST00000415380 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
SCARB1-203ENST00000415380 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
SCARB1-203ENST00000415380 Q9HAA7 133 aa12.67□□□□□ -0.38
SCARB1-203ENST00000415380 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
SCARB1-203ENST00000415380 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
SCARB1-203ENST00000415380 ESM1Q9NQ30 184 aa12.67□□□□□ -0.38
SCARB1-203ENST00000415380 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
SCARB1-203ENST00000415380 UBR5O95071 2799 aaPredicted RBP12.65□□□□□ -0.38
SCARB1-203ENST00000415380 C2CD3Q4AC94 2353 aa12.65□□□□□ -0.38
SCARB1-203ENST00000415380 BBC3Q96PG8 261 aaPredicted RBP12.65□□□□□ -0.38
SCARB1-203ENST00000415380 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
SCARB1-203ENST00000415380 LINC00158P58513 81 aa12.64□□□□□ -0.39
SCARB1-203ENST00000415380 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
SCARB1-203ENST00000415380 CMC4P56277 68 aaPredicted RBP12.64□□□□□ -0.39
SCARB1-203ENST00000415380 IMUPQ9GZP8 106 aa12.64□□□□□ -0.39
SCARB1-203ENST00000415380 ZFYVE26Q68DK2 2539 aa12.64□□□□□ -0.39
SCARB1-203ENST00000415380 NOTCH3Q9UM47 2321 aa12.64□□□□□ -0.39
SCARB1-203ENST00000415380 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
SCARB1-203ENST00000415380 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 MALP21145 153 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 C19orf73Q9NVV2 129 aa12.63□□□□□ -0.39
SCARB1-203ENST00000415380 FHL2Q14192 279 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 SMIM11BQ8TCY0 68 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 NBPF19A0A087WUL8 3843 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
SCARB1-203ENST00000415380 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 CCL18P55774 89 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 NF1P21359 2839 aa12.62□□□□□ -0.39
SCARB1-203ENST00000415380 A0A087WYN8 130 aa12.61□□□□□ -0.39
SCARB1-203ENST00000415380 INAFM2P0DMQ5 153 aa12.61□□□□□ -0.39
SCARB1-203ENST00000415380 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
SCARB1-203ENST00000415380 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
SCARB1-203ENST00000415380 A0A087WZ39 114 aa12.6□□□□□ -0.39
SCARB1-203ENST00000415380 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 IGLV1-51P01701 117 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 GAGE2AQ6NT46 116 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 JMJD1CQ15652 2540 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 PFN2P35080 140 aa12.59□□□□□ -0.39
SCARB1-203ENST00000415380 FAM110AQ9BQ89 295 aa12.58□□□□□ -0.4
SCARB1-203ENST00000415380 SVIPQ8NHG7 77 aa12.58□□□□□ -0.4
SCARB1-203ENST00000415380 LINC01006Q8NI28 216 aa12.58□□□□□ -0.4
SCARB1-203ENST00000415380 USP24Q9UPU5 2620 aa12.57□□□□□ -0.4
SCARB1-203ENST00000415380 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
SCARB1-203ENST00000415380 DNAL4O96015 105 aa12.57□□□□□ -0.4
SCARB1-203ENST00000415380 ZNF843Q8N446 348 aa12.57□□□□□ -0.4
SCARB1-203ENST00000415380 APCP25054 2843 aa12.56□□□□□ -0.4
SCARB1-203ENST00000415380 C9orf129Q5T035 196 aaKnown RBP12.56□□□□□ -0.4
SCARB1-203ENST00000415380 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
SCARB1-203ENST00000415380 H0YGX0 51 aa12.55□□□□□ -0.4
SCARB1-203ENST00000415380 ATP5G1P05496 136 aa12.55□□□□□ -0.4
SCARB1-203ENST00000415380 PAX4O43316 350 aa12.54□□□□□ -0.4
SCARB1-203ENST00000415380 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
SCARB1-203ENST00000415380 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
SCARB1-203ENST00000415380 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
SCARB1-203ENST00000415380 LECT2O14960 151 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 CXCL5P42830 114 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 C6orf226Q5I0X4 101 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 OR13C6PQ8NH95 151 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 C16orf95Q9H693 158 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 C14orf132Q9NPU4 83 aa12.52□□□□□ -0.41
SCARB1-203ENST00000415380 SETD2Q9BYW2 2564 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-203ENST00000415380 XCL1P47992 114 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms