RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CKS2P33552 79 aa11.71□□□□□ -0.53
UBXN4-202ENST00000415164 UNQ6190/PRO20217Q6UXQ8 127 aa11.71□□□□□ -0.53
UBXN4-202ENST00000415164 KRTAP11-1Q8IUC1 163 aa11.71□□□□□ -0.53
UBXN4-202ENST00000415164 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.53
UBXN4-202ENST00000415164 UBE2D1P51668 147 aa11.7□□□□□ -0.54
UBXN4-202ENST00000415164 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
UBXN4-202ENST00000415164 HBBP68871 147 aa11.69□□□□□ -0.54
UBXN4-202ENST00000415164 PRR4Q16378 134 aa11.69□□□□□ -0.54
UBXN4-202ENST00000415164 C6orf48Q9UBA6 75 aa11.69□□□□□ -0.54
UBXN4-202ENST00000415164 M0QXV9 152 aa11.68□□□□□ -0.54
UBXN4-202ENST00000415164 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
UBXN4-202ENST00000415164 ADIRFQ15847 76 aa11.68□□□□□ -0.54
UBXN4-202ENST00000415164 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
UBXN4-202ENST00000415164 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
UBXN4-202ENST00000415164 IGHV3OR16-9A0A0B4J2B5 98 aa11.67□□□□□ -0.54
UBXN4-202ENST00000415164 F8WDY8 70 aa11.67□□□□□ -0.54
UBXN4-202ENST00000415164 TCAPO15273 167 aa11.67□□□□□ -0.54
UBXN4-202ENST00000415164 TNFRSF6BO95407 300 aa11.67□□□□□ -0.54
UBXN4-202ENST00000415164 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
UBXN4-202ENST00000415164 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
UBXN4-202ENST00000415164 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
UBXN4-202ENST00000415164 SMIM2Q9BVW6 85 aa11.66□□□□□ -0.54
UBXN4-202ENST00000415164 LINC00862A6NCI5 91 aa11.65□□□□□ -0.54
UBXN4-202ENST00000415164 D6R8Y8 96 aa11.65□□□□□ -0.54
UBXN4-202ENST00000415164 FAM74A3Q4VXF1 159 aa11.65□□□□□ -0.54
UBXN4-202ENST00000415164 AKAP14Q86UN6 197 aa11.65□□□□□ -0.54
UBXN4-202ENST00000415164 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
UBXN4-202ENST00000415164 TLX1NBP0CAT3 122 aa11.64□□□□□ -0.55
UBXN4-202ENST00000415164 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
UBXN4-202ENST00000415164 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
UBXN4-202ENST00000415164 hCG_2014768A0A024R1R8 64 aa11.63□□□□□ -0.55
UBXN4-202ENST00000415164 TRBV24-1A0A075B6N3 115 aa11.63□□□□□ -0.55
UBXN4-202ENST00000415164 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
UBXN4-202ENST00000415164 FAM104AQ969W3 186 aa11.63□□□□□ -0.55
UBXN4-202ENST00000415164 NPYP01303 97 aa11.62□□□□□ -0.55
UBXN4-202ENST00000415164 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
UBXN4-202ENST00000415164 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
UBXN4-202ENST00000415164 SMIM27A0A1W2PRY6 76 aa11.61□□□□□ -0.55
UBXN4-202ENST00000415164 KRTAP1-4P0C5Y4 121 aa11.61□□□□□ -0.55
UBXN4-202ENST00000415164 IFI27P40305 119 aaPredicted RBP11.61□□□□□ -0.55
UBXN4-202ENST00000415164 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
UBXN4-202ENST00000415164 A0A1B0GW15 77 aa11.6□□□□□ -0.55
UBXN4-202ENST00000415164 RAB5AP20339 215 aa11.6□□□□□ -0.55
UBXN4-202ENST00000415164 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
UBXN4-202ENST00000415164 F8W036 122 aa11.59□□□□□ -0.55
UBXN4-202ENST00000415164 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
UBXN4-202ENST00000415164 NAT8Q9UHE5 227 aa11.59□□□□□ -0.55
UBXN4-202ENST00000415164 MUC2Q02817 5179 aa11.59□□□□□ -0.55
UBXN4-202ENST00000415164 TRBV30A0A0K0K1B3 111 aa11.58□□□□□ -0.56
UBXN4-202ENST00000415164 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
UBXN4-202ENST00000415164 S100A8P05109 93 aa11.58□□□□□ -0.56
UBXN4-202ENST00000415164 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
UBXN4-202ENST00000415164 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
UBXN4-202ENST00000415164 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
UBXN4-202ENST00000415164 TSPAN13O95857 204 aa11.56□□□□□ -0.56
UBXN4-202ENST00000415164 LINC00469Q8N7U9 141 aa11.56□□□□□ -0.56
UBXN4-202ENST00000415164 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
UBXN4-202ENST00000415164 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
UBXN4-202ENST00000415164 PRSS2P07478 247 aa11.55□□□□□ -0.56
UBXN4-202ENST00000415164 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
UBXN4-202ENST00000415164 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
UBXN4-202ENST00000415164 LOC389332A0A1B0GUA5 103 aa11.54□□□□□ -0.56
UBXN4-202ENST00000415164 ORMDL3Q8N138 153 aa11.54□□□□□ -0.56
UBXN4-202ENST00000415164 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
UBXN4-202ENST00000415164 C9JQL5 133 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 PPBPP02775 128 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 CKS1BP61024 79 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 ZC2HC1BQ5TFG8 222 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 TMEM136Q6ZRR5 245 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 C2orf88Q9BSF0 95 aa11.53□□□□□ -0.56
UBXN4-202ENST00000415164 ZNF861PO60384 105 aa11.52□□□□□ -0.57
UBXN4-202ENST00000415164 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
UBXN4-202ENST00000415164 SRSF3P84103 164 aaKnown RBP11.51□□□□□ -0.57
UBXN4-202ENST00000415164 Q6ZN92 141 aa11.51□□□□□ -0.57
UBXN4-202ENST00000415164 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
UBXN4-202ENST00000415164 CARHSP1Q9Y2V2 147 aaKnown RBP11.51□□□□□ -0.57
UBXN4-202ENST00000415164 PYGO1Q9Y3Y4 419 aa11.51□□□□□ -0.57
UBXN4-202ENST00000415164 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
UBXN4-202ENST00000415164 PEA15Q15121 130 aa11.5□□□□□ -0.57
UBXN4-202ENST00000415164 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
UBXN4-202ENST00000415164 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
UBXN4-202ENST00000415164 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
UBXN4-202ENST00000415164 NUPR1O60356 82 aa11.48□□□□□ -0.57
UBXN4-202ENST00000415164 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
UBXN4-202ENST00000415164 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
UBXN4-202ENST00000415164 VCX2Q9H322 139 aa11.47□□□□□ -0.57
UBXN4-202ENST00000415164 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
UBXN4-202ENST00000415164 CYSLTR1Q9Y271 337 aa11.47□□□□□ -0.57
UBXN4-202ENST00000415164 C2orf66Q6UXQ4 117 aa11.46□□□□□ -0.57
UBXN4-202ENST00000415164 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
UBXN4-202ENST00000415164 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
UBXN4-202ENST00000415164 Q8IZM0 81 aa11.44□□□□□ -0.58
UBXN4-202ENST00000415164 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
UBXN4-202ENST00000415164 RPL28P46779 137 aaKnown RBP11.43□□□□□ -0.58
UBXN4-202ENST00000415164 LINC00173Q6ZV60 143 aa11.43□□□□□ -0.58
UBXN4-202ENST00000415164 A0A087X002 238 aa11.42□□□□□ -0.58
UBXN4-202ENST00000415164 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
UBXN4-202ENST00000415164 Q8N8P6 123 aa11.42□□□□□ -0.58
UBXN4-202ENST00000415164 CRYGAP11844 174 aa11.41□□□□□ -0.58
UBXN4-202ENST00000415164 AMELXQ99217 191 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms