RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SEC11AP67812 179 aa9.49□□□□□ -0.89
CHD1-202ENST00000414220 HAMPP81172 84 aa9.49□□□□□ -0.89
CHD1-202ENST00000414220 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
CHD1-202ENST00000414220 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
CHD1-202ENST00000414220 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
CHD1-202ENST00000414220 IGIPA6NJ69 53 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 SLPIP03973 132 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 Q5VSD8 79 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 ERASQ7Z444 233 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 SLC7A5P1Q8MH63 180 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
CHD1-202ENST00000414220 APOBP04114 4563 aaKnown RBP9.48□□□□□ -0.89
CHD1-202ENST00000414220 IGHV3OR16-9A0A0B4J2B5 98 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 F8WDY8 70 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
CHD1-202ENST00000414220 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 FAM104AQ969W3 186 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 HSPG2P98160 4391 aa9.47□□□□□ -0.89
CHD1-202ENST00000414220 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 LINC01546A6NGU7 62 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 LINC00614P0C842 121 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 UBE2D1P51668 147 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 SPAG11BQ08648 103 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 ORAOV1Q8WV07 137 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 AMELXQ99217 191 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
CHD1-202ENST00000414220 COX6A2Q02221 97 aa9.45□□□□□ -0.9
CHD1-202ENST00000414220 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
CHD1-202ENST00000414220 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
CHD1-202ENST00000414220 GEMIN7Q9H840 131 aaKnown RBP9.45□□□□□ -0.9
CHD1-202ENST00000414220 A0A087WZ39 114 aa9.44□□□□□ -0.9
CHD1-202ENST00000414220 HERVK_113P63121 156 aa9.44□□□□□ -0.9
CHD1-202ENST00000414220 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
CHD1-202ENST00000414220 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
CHD1-202ENST00000414220 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
CHD1-202ENST00000414220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
CHD1-202ENST00000414220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
CHD1-202ENST00000414220 NDUFA1O15239 70 aa9.42□□□□□ -0.9
CHD1-202ENST00000414220 CBLN2Q8IUK8 224 aa9.42□□□□□ -0.9
CHD1-202ENST00000414220 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
CHD1-202ENST00000414220 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
CHD1-202ENST00000414220 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 LOC107984640A0A0U1RRK4 108 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 HBDP02042 147 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 PRSS2P07478 247 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
CHD1-202ENST00000414220 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
CHD1-202ENST00000414220 PMVKQ15126 192 aa9.4□□□□□ -0.9
CHD1-202ENST00000414220 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
CHD1-202ENST00000414220 Q6ZRU5 148 aa9.4□□□□□ -0.9
CHD1-202ENST00000414220 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
CHD1-202ENST00000414220 YPEL4Q96NS1 127 aa9.4□□□□□ -0.9
CHD1-202ENST00000414220 ATP5LO75964 103 aa9.39□□□□□ -0.91
CHD1-202ENST00000414220 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
CHD1-202ENST00000414220 MRPL35Q9NZE8 188 aaKnown RBP9.39□□□□□ -0.91
CHD1-202ENST00000414220 A0A087WYN8 130 aa9.38□□□□□ -0.91
CHD1-202ENST00000414220 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
CHD1-202ENST00000414220 NDUFA6P56556 154 aa9.38□□□□□ -0.91
CHD1-202ENST00000414220 KRTAP17-1Q9BYP8 105 aa9.38□□□□□ -0.91
CHD1-202ENST00000414220 CST9LQ9H4G1 147 aa9.38□□□□□ -0.91
CHD1-202ENST00000414220 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 CKS1BP61024 79 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 LINC00469Q8N7U9 141 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 STPG4Q8N801 248 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
CHD1-202ENST00000414220 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 A0A096LNI7 61 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 H3BRM9 83 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 PANO1I0J062 215 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
CHD1-202ENST00000414220 HSBP1O75506 76 aa9.35□□□□□ -0.91
CHD1-202ENST00000414220 TRGC2P03986 189 aa9.35□□□□□ -0.91
CHD1-202ENST00000414220 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
CHD1-202ENST00000414220 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
CHD1-202ENST00000414220 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
CHD1-202ENST00000414220 URB1-AS1Q96HZ7 61 aa9.35□□□□□ -0.91
CHD1-202ENST00000414220 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
CHD1-202ENST00000414220 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
CHD1-202ENST00000414220 Q8IZM0 81 aa9.34□□□□□ -0.91
CHD1-202ENST00000414220 CXCL5P42830 114 aa9.33□□□□□ -0.92
CHD1-202ENST00000414220 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
CHD1-202ENST00000414220 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
CHD1-202ENST00000414220 PDZD11Q5EBL8 140 aa9.33□□□□□ -0.92
CHD1-202ENST00000414220 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
CHD1-202ENST00000414220 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms