RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 MSMBP08118 114 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 BAALC-AS2P0C853 105 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 LINC01561Q8N1V8 128 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 ZNF843Q8N446 348 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 LINC00337Q8N6G1 96 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 POLEQ07864 2286 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 SPTBN4Q9H254 2564 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 ANKHD1Q8IWZ3 2542 aaKnown RBP2.21□□□□□ -2.06
CUL3-204ENST00000409777 TRAV25A0A0B4J276 109 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 BCE1O60756 84 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 PRSS2P07478 247 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 HOXD3P31249 432 aaPredicted RBP2.21□□□□□ -2.06
CUL3-204ENST00000409777 RPL18AQ02543 176 aaKnown RBP2.21□□□□□ -2.06
CUL3-204ENST00000409777 RNASE13Q5GAN3 156 aaKnown RBP2.21□□□□□ -2.06
CUL3-204ENST00000409777 MAP6D1Q9H9H5 199 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 SPTBN2O15020 2390 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 PLAC8L1A1L4L8 177 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 H0YGX0 51 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 J3KT08 172 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 LY6EQ16553 131 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 PRIMA1Q86XR5 153 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 BBC3Q96PG8 261 aaPredicted RBP2.2□□□□□ -2.06
CUL3-204ENST00000409777 DUX5Q96PT3 197 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 CELSR1Q9NYQ6 3014 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 DOPEY2Q9Y3R5 2298 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 TRBV10-3A0A0K0K1G6 114 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 KNCNA6PVL3 124 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 NDUFC2-KCTD14E9PQ53 114 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 K7EQD1 137 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 IGHV4-59P01825 116 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 DSCR9P59020 149 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 TMEM258P61165 79 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 C9orf129Q5T035 196 aaKnown RBP2.2□□□□□ -2.06
CUL3-204ENST00000409777 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 Q6YL49 198 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 C1orf158Q8N1D5 194 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 C4orf3Q8WVX3 66 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
CUL3-204ENST00000409777 LAMA5O15230 3695 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 IGHV4-30-2A0A087WSY4 118 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 IGHV3OR16-9A0A0B4J2B5 98 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 B4DSR2 109 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 INSP01308 110 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 C9orf153Q5TBE3 101 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
CUL3-204ENST00000409777 FLNBO75369 2602 aaKnown RBP2.19□□□□□ -2.06
CUL3-204ENST00000409777 ABCA4P78363 2273 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 IGKV3-7A0A075B6H7 116 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 A0A087WYN8 130 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 A0A087WZ39 114 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 LOC100131303A0A0U1RQF7 123 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 KRTAP23-1A1A580 65 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 CCKP06307 115 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 NANOS2P60321 138 aaKnown RBP2.19□□□□□ -2.06
CUL3-204ENST00000409777 NPC2P61916 151 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 DEFB114Q30KQ6 69 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 DEFB112Q30KQ8 113 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 Q75L30 129 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 LINC00612Q8N6U2 182 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 SMIM11BQ8TCY0 68 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 KRTAP4-5Q9BYR2 181 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 RELNP78509 3460 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 IGHV3-73A0A0B4J1V6 119 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 TRBV6-4A0A1B0GX49 114 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 OXTP01178 125 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 GIG44P09565 113 aaPredicted RBP2.19□□□□□ -2.06
CUL3-204ENST00000409777 CCL18P55774 89 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 DEFB131AP59861 70 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 C5orf47Q569G3 176 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 CD164L2Q6UWJ8 174 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 DPH3Q96FX2 82 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 LINC00846Q9NV44 126 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 CR1P17927 2039 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 CEP250Q9BV73 2442 aa2.19□□□□□ -2.06
CUL3-204ENST00000409777 ROS1P08922 2347 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 IGKV3-20P01619 116 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 ATP5J2P56134 94 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 ODF3L2Q3SX64 289 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 LCE5AQ5TCM9 118 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 NCOR2Q9Y618 2525 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 LOC110117498A0A087WWA1 95 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 IGHV3-38A0A0C4DH36 116 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 SMIM9A6NGZ8 99 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 NDUFC2O95298 119 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 CRPP02741 224 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 PRM2P04554 102 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 Q5XG85 94 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 CSNK1G2-AS1Q8NCQ2 148 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 WWC2-AS2Q96NR7 200 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 HELZ2Q9BYK8 2649 aaKnown RBP2.18□□□□□ -2.06
CUL3-204ENST00000409777 MYO18BQ8IUG5 2567 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 VPS13CQ709C8 3753 aa2.18□□□□□ -2.06
CUL3-204ENST00000409777 IGHV4-28A0A0C4DH34 117 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 RPL36AP83881 106 aaKnown RBP2.17□□□□□ -2.06
CUL3-204ENST00000409777 FAM19A5Q7Z5A7 132 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms