RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
CBX3-203ENST00000409747 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
CBX3-203ENST00000409747 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
CBX3-203ENST00000409747 ATP5L2Q7Z4Y8 100 aa9.16□□□□□ -0.94
CBX3-203ENST00000409747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.15□□□□□ -0.94
CBX3-203ENST00000409747 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 NPYP01303 97 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 RAB5AP20339 215 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 ORAOV1Q8WV07 137 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 IFITM10A6NMD0 228 aa9.14□□□□□ -0.95
CBX3-203ENST00000409747 MRPL35Q9NZE8 188 aaKnown RBP9.14□□□□□ -0.95
CBX3-203ENST00000409747 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
CBX3-203ENST00000409747 IFI27P40305 119 aaPredicted RBP9.13□□□□□ -0.95
CBX3-203ENST00000409747 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
CBX3-203ENST00000409747 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
CBX3-203ENST00000409747 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
CBX3-203ENST00000409747 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
CBX3-203ENST00000409747 NDUFA1O15239 70 aa9.12□□□□□ -0.95
CBX3-203ENST00000409747 TGIF2-C20orf24A0A0A6YYL0 155 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 MT-ND6P03923 174 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
CBX3-203ENST00000409747 LAMTOR2Q9Y2Q5 125 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
CBX3-203ENST00000409747 PNRC1Q12796 327 aaPredicted RBP9.09□□□□□ -0.95
CBX3-203ENST00000409747 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
CBX3-203ENST00000409747 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 A0A087WZ39 114 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
CBX3-203ENST00000409747 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 LRP2P98164 4655 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
CBX3-203ENST00000409747 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
CBX3-203ENST00000409747 MT-ND4LP03901 98 aa9.06□□□□□ -0.96
CBX3-203ENST00000409747 Q6ZN92 141 aa9.06□□□□□ -0.96
CBX3-203ENST00000409747 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
CBX3-203ENST00000409747 LINC00242Q5T6M2 205 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 CYSLTR1Q9Y271 337 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 RAB14P61106 215 aa9.05□□□□□ -0.96
CBX3-203ENST00000409747 TRBV30A0A0K0K1B3 111 aa9.04□□□□□ -0.96
CBX3-203ENST00000409747 K7EMI3 77 aa9.04□□□□□ -0.96
CBX3-203ENST00000409747 ORMDL2Q53FV1 153 aa9.04□□□□□ -0.96
CBX3-203ENST00000409747 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
CBX3-203ENST00000409747 Q8N8P6 123 aa9.04□□□□□ -0.96
CBX3-203ENST00000409747 NPSP0C0P6 89 aa9.03□□□□□ -0.96
CBX3-203ENST00000409747 UBE2D1P51668 147 aa9.03□□□□□ -0.96
CBX3-203ENST00000409747 KIAA0087Q14695 138 aa9.03□□□□□ -0.96
CBX3-203ENST00000409747 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
CBX3-203ENST00000409747 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
CBX3-203ENST00000409747 GAGE2EQ4V326 116 aa9.02□□□□□ -0.96
CBX3-203ENST00000409747 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.96
CBX3-203ENST00000409747 DIRC1Q969H9 104 aa9.02□□□□□ -0.96
CBX3-203ENST00000409747 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.96
CBX3-203ENST00000409747 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.96
CBX3-203ENST00000409747 FAM168BA1KXE4 195 aa9.02□□□□□ -0.97
CBX3-203ENST00000409747 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
CBX3-203ENST00000409747 VCX2Q9H322 139 aa9.02□□□□□ -0.97
CBX3-203ENST00000409747 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
CBX3-203ENST00000409747 ODF1Q14990 250 aa9.01□□□□□ -0.97
CBX3-203ENST00000409747 NXT2Q9NPJ8 142 aaKnown RBP9.01□□□□□ -0.97
CBX3-203ENST00000409747 PRSS2P07478 247 aa9□□□□□ -0.97
CBX3-203ENST00000409747 G0S2P27469 103 aa9□□□□□ -0.97
CBX3-203ENST00000409747 PAPPA-AS1Q5QFB9 102 aa9□□□□□ -0.97
CBX3-203ENST00000409747 M0QXV9 152 aa9□□□□□ -0.97
CBX3-203ENST00000409747 AMELXQ99217 191 aa9□□□□□ -0.97
CBX3-203ENST00000409747 CTDSP1Q9GZU7 261 aa9□□□□□ -0.97
CBX3-203ENST00000409747 UBE2BP63146 152 aa8.99□□□□□ -0.97
CBX3-203ENST00000409747 SEC11AP67812 179 aa8.99□□□□□ -0.97
CBX3-203ENST00000409747 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
CBX3-203ENST00000409747 LINC00173Q6ZV60 143 aa8.99□□□□□ -0.97
CBX3-203ENST00000409747 CKS1BP61024 79 aa8.98□□□□□ -0.97
CBX3-203ENST00000409747 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
CBX3-203ENST00000409747 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
CBX3-203ENST00000409747 H0Y9J4 135 aa8.97□□□□□ -0.97
CBX3-203ENST00000409747 HERVK_113P63121 156 aa8.97□□□□□ -0.97
CBX3-203ENST00000409747 Q8IZM0 81 aa8.97□□□□□ -0.97
CBX3-203ENST00000409747 TOMM7Q9P0U1 55 aa8.97□□□□□ -0.97
CBX3-203ENST00000409747 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
CBX3-203ENST00000409747 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
CBX3-203ENST00000409747 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
CBX3-203ENST00000409747 KRTAP11-1Q8IUC1 163 aa8.95□□□□□ -0.98
CBX3-203ENST00000409747 TIMM17AQ99595 171 aa8.95□□□□□ -0.98
CBX3-203ENST00000409747 ALKBH7Q9BT30 221 aaPredicted RBP8.95□□□□□ -0.98
CBX3-203ENST00000409747 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
CBX3-203ENST00000409747 GEMIN7Q9H840 131 aaKnown RBP8.94□□□□□ -0.98
CBX3-203ENST00000409747 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
CBX3-203ENST00000409747 IGLV1-50A0A075B6I6 118 aa8.93□□□□□ -0.98
CBX3-203ENST00000409747 TRAV9-1A0A075B6T8 112 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms