RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 H3BT86 120 aa11.97□□□□□ -0.49
PTPRN2-205ENST00000409483 NDUFA1O15239 70 aa11.96□□□□□ -0.49
PTPRN2-205ENST00000409483 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
PTPRN2-205ENST00000409483 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
PTPRN2-205ENST00000409483 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
PTPRN2-205ENST00000409483 IGHV4-28A0A0C4DH34 117 aa11.96□□□□□ -0.5
PTPRN2-205ENST00000409483 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.5
PTPRN2-205ENST00000409483 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.5
PTPRN2-205ENST00000409483 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
PTPRN2-205ENST00000409483 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
PTPRN2-205ENST00000409483 HILS1P60008 231 aa11.95□□□□□ -0.5
PTPRN2-205ENST00000409483 CCL18P55774 89 aa11.94□□□□□ -0.5
PTPRN2-205ENST00000409483 C1orf158Q8N1D5 194 aa11.94□□□□□ -0.5
PTPRN2-205ENST00000409483 SS18L2Q9UHA2 77 aa11.94□□□□□ -0.5
PTPRN2-205ENST00000409483 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-205ENST00000409483 TIRAPP58753 221 aa11.94□□□□□ -0.5
PTPRN2-205ENST00000409483 UBE2BP63146 152 aa11.93□□□□□ -0.5
PTPRN2-205ENST00000409483 UBE2D1P51668 147 aa11.93□□□□□ -0.5
PTPRN2-205ENST00000409483 MGAM2Q2M2H8 2515 aa11.93□□□□□ -0.5
PTPRN2-205ENST00000409483 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-205ENST00000409483 REV3LO60673 3130 aa11.92□□□□□ -0.5
PTPRN2-205ENST00000409483 LINC00242Q5T6M2 205 aa11.91□□□□□ -0.5
PTPRN2-205ENST00000409483 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
PTPRN2-205ENST00000409483 RMI2Q96E14 147 aa11.91□□□□□ -0.5
PTPRN2-205ENST00000409483 ATRQ13535 2644 aa11.91□□□□□ -0.5
PTPRN2-205ENST00000409483 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
PTPRN2-205ENST00000409483 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
PTPRN2-205ENST00000409483 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 UBE2D3P61077 147 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 UBE2D2P62837 147 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 COX6A2Q02221 97 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 TRACP01848 142 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 Q9UF83 564 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
PTPRN2-205ENST00000409483 ITPR3Q14573 2671 aa11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 CXCL5P42830 114 aa11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 ACYP1P07311 99 aa11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
PTPRN2-205ENST00000409483 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
PTPRN2-205ENST00000409483 TRBV30A0A0K0K1B3 111 aa11.87□□□□□ -0.51
PTPRN2-205ENST00000409483 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
PTPRN2-205ENST00000409483 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
PTPRN2-205ENST00000409483 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
PTPRN2-205ENST00000409483 SPTBN5Q9NRC6 3674 aaKnown RBP11.86□□□□□ -0.51
PTPRN2-205ENST00000409483 IGLV4-60A0A075B6I1 120 aa11.86□□□□□ -0.51
PTPRN2-205ENST00000409483 DEFB131BA0A096LNP1 70 aa11.86□□□□□ -0.51
PTPRN2-205ENST00000409483 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 A0A1B0GX51 115 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 BRI3O95415 125 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 CLUHP3Q96NS8 147 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 IGLV1-51P01701 117 aa11.85□□□□□ -0.51
PTPRN2-205ENST00000409483 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
PTPRN2-205ENST00000409483 ADGRG4Q8IZF6 3080 aa11.84□□□□□ -0.51
PTPRN2-205ENST00000409483 RNF183Q96D59 192 aa11.84□□□□□ -0.51
PTPRN2-205ENST00000409483 LINC00315P59091 139 aa11.83□□□□□ -0.52
PTPRN2-205ENST00000409483 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
PTPRN2-205ENST00000409483 RBM3P98179 157 aaKnown RBP11.82□□□□□ -0.52
PTPRN2-205ENST00000409483 MAST4O15021 2626 aa11.82□□□□□ -0.52
PTPRN2-205ENST00000409483 MIFP14174 115 aa11.82□□□□□ -0.52
PTPRN2-205ENST00000409483 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
PTPRN2-205ENST00000409483 H7C423 109 aa11.81□□□□□ -0.52
PTPRN2-205ENST00000409483 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
PTPRN2-205ENST00000409483 C9orf116Q5BN46 136 aaPredicted RBP11.81□□□□□ -0.52
PTPRN2-205ENST00000409483 RETNQ9HD89 108 aa11.81□□□□□ -0.52
PTPRN2-205ENST00000409483 IGHV4-30-4P0DP06 118 aa11.8□□□□□ -0.52
PTPRN2-205ENST00000409483 XGP55808 180 aa11.8□□□□□ -0.52
PTPRN2-205ENST00000409483 JMJD7-PLA2G4BH0Y9G9 81 aa11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 LST1O00453 97 aa11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 PRR3P79522 188 aaKnown RBP11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 CDK2AP2O75956 126 aa11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 KPRPQ5T749 579 aaPredicted RBP11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 SMIM11BQ8TCY0 68 aa11.79□□□□□ -0.52
PTPRN2-205ENST00000409483 AMELXQ99217 191 aa11.78□□□□□ -0.52
PTPRN2-205ENST00000409483 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
PTPRN2-205ENST00000409483 ATMQ13315 3056 aa11.78□□□□□ -0.52
PTPRN2-205ENST00000409483 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
PTPRN2-205ENST00000409483 COX7BP24311 80 aa11.77□□□□□ -0.52
PTPRN2-205ENST00000409483 HELZ2Q9BYK8 2649 aaKnown RBP11.77□□□□□ -0.52
PTPRN2-205ENST00000409483 TIMM17BO60830 172 aa11.77□□□□□ -0.53
PTPRN2-205ENST00000409483 FHL2Q14192 279 aa11.76□□□□□ -0.53
PTPRN2-205ENST00000409483 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
PTPRN2-205ENST00000409483 LINC00643Q86TS7 51 aa11.76□□□□□ -0.53
PTPRN2-205ENST00000409483 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
PTPRN2-205ENST00000409483 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■□□ 15.1
PTPRN2-205ENST00000409483 TRAV23DV6A0A075B6W5 121 aa11.75□□□□□ -0.53
PTPRN2-205ENST00000409483 NREPQ16612 68 aa11.75□□□□□ -0.53
PTPRN2-205ENST00000409483 CHD6Q8TD26 2715 aa11.75□□□□□ -0.53
PTPRN2-205ENST00000409483 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
PTPRN2-205ENST00000409483 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
PTPRN2-205ENST00000409483 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
PTPRN2-205ENST00000409483 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms