RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 KIAA1549Q9HCM3 1950 aa9.44□□□□□ -0.9
RNF43-201ENST00000407977 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
RNF43-201ENST00000407977 PRR4Q16378 134 aa9.44□□□□□ -0.9
RNF43-201ENST00000407977 KIAA1549LQ6ZVL6 1849 aa9.44□□□□□ -0.9
RNF43-201ENST00000407977 PRYO14603 147 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.43□□□□□ -0.9
RNF43-201ENST00000407977 AMELXQ99217 191 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 CSPG4Q6UVK1 2322 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 ZNF702PQ9H963 129 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
RNF43-201ENST00000407977 ZFHX2Q9C0A1 2572 aaPredicted RBP9.43□□□□□ -0.9
RNF43-201ENST00000407977 A0A096LNJ9 63 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 PMAIP1Q13794 54 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 HCFC1P51610 2035 aa9.42□□□□□ -0.9
RNF43-201ENST00000407977 PCNX3Q9H6A9 2034 aa9.41□□□□□ -0.9
RNF43-201ENST00000407977 A0A087WVE0 104 aa9.41□□□□□ -0.9
RNF43-201ENST00000407977 WFDC10AQ9H1F0 79 aa9.41□□□□□ -0.9
RNF43-201ENST00000407977 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
RNF43-201ENST00000407977 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
RNF43-201ENST00000407977 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
RNF43-201ENST00000407977 IGLV2-18A0A075B6J9 118 aa9.4□□□□□ -0.9
RNF43-201ENST00000407977 A0A0J9YWU9 116 aa9.4□□□□□ -0.9
RNF43-201ENST00000407977 Q8N3U1 123 aa9.4□□□□□ -0.9
RNF43-201ENST00000407977 C19orf84I3L1E1 186 aa9.39□□□□□ -0.91
RNF43-201ENST00000407977 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
RNF43-201ENST00000407977 C7orf33Q8WU49 177 aa9.39□□□□□ -0.91
RNF43-201ENST00000407977 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
RNF43-201ENST00000407977 TRBV10-3A0A0K0K1G6 114 aa9.39□□□□□ -0.91
RNF43-201ENST00000407977 BRI3O95415 125 aa9.39□□□□□ -0.91
RNF43-201ENST00000407977 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 A0A087WYN8 130 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
RNF43-201ENST00000407977 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
RNF43-201ENST00000407977 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
RNF43-201ENST00000407977 BDP1A6H8Y1 2624 aa9.37□□□□□ -0.91
RNF43-201ENST00000407977 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
RNF43-201ENST00000407977 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 SONP18583 2426 aaKnown RBP9.36□□□□□ -0.91
RNF43-201ENST00000407977 F8WDY8 70 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
RNF43-201ENST00000407977 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
RNF43-201ENST00000407977 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
RNF43-201ENST00000407977 TTC28Q96AY4 2481 aa9.35□□□□□ -0.91
RNF43-201ENST00000407977 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
RNF43-201ENST00000407977 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
RNF43-201ENST00000407977 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
RNF43-201ENST00000407977 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 LTBP2Q14767 1821 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 ZNF580Q9UK33 172 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 ATG2AQ2TAZ0 1938 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 COX6A2Q02221 97 aa9.34□□□□□ -0.91
RNF43-201ENST00000407977 TECTAO75443 2155 aa9.33□□□□□ -0.92
RNF43-201ENST00000407977 BCE1O60756 84 aa9.33□□□□□ -0.92
RNF43-201ENST00000407977 LINC01006Q8NI28 216 aa9.33□□□□□ -0.92
RNF43-201ENST00000407977 BEAN1Q3B7T3 259 aa9.33□□□□□ -0.92
RNF43-201ENST00000407977 CXCL6P80162 114 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 DSCAMO60469 2012 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 PLAC8L1A1L4L8 177 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 ARHGAP32A7KAX9 2087 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 PTPN13Q12923 2485 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 PCDH15Q96QU1 1955 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 TANC2Q9HCD6 1990 aa9.32□□□□□ -0.92
RNF43-201ENST00000407977 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 Q6ZVQ6 151 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 PRM2P04554 102 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 ZNF843Q8N446 348 aa9.31□□□□□ -0.92
RNF43-201ENST00000407977 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
RNF43-201ENST00000407977 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
RNF43-201ENST00000407977 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
RNF43-201ENST00000407977 CRYGAP11844 174 aa9.3□□□□□ -0.92
RNF43-201ENST00000407977 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
RNF43-201ENST00000407977 LINC00575Q6W349 94 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 MYO18BQ8IUG5 2567 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 C10orf142B7Z368 130 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 ESRGQ1W209 222 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
RNF43-201ENST00000407977 EML5Q05BV3 1969 aa9.29□□□□□ -0.92
RNF43-201ENST00000407977 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
RNF43-201ENST00000407977 CUL9Q8IWT3 2517 aa9.28□□□□□ -0.92
RNF43-201ENST00000407977 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
RNF43-201ENST00000407977 IGLV9-49A0A0B4J1Y8 123 aa9.27□□□□□ -0.92
RNF43-201ENST00000407977 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms