RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
HERC3-203ENST00000407637 TRBV7-6A0A0J9YX20 115 aa9.08□□□□□ -0.96
HERC3-203ENST00000407637 CCL18P55774 89 aa9.08□□□□□ -0.96
HERC3-203ENST00000407637 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
HERC3-203ENST00000407637 USMG5Q96IX5 58 aa9.08□□□□□ -0.96
HERC3-203ENST00000407637 LINC00158P58513 81 aa9.07□□□□□ -0.96
HERC3-203ENST00000407637 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
HERC3-203ENST00000407637 TOMM7Q9P0U1 55 aa9.07□□□□□ -0.96
HERC3-203ENST00000407637 TRBV10-3A0A0K0K1G6 114 aa9.06□□□□□ -0.96
HERC3-203ENST00000407637 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
HERC3-203ENST00000407637 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
HERC3-203ENST00000407637 CREBBPQ92793 2442 aa9.06□□□□□ -0.96
HERC3-203ENST00000407637 TRAV10A0A0B4J240 114 aa9.05□□□□□ -0.96
HERC3-203ENST00000407637 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
HERC3-203ENST00000407637 NBL1P41271 181 aa9.05□□□□□ -0.96
HERC3-203ENST00000407637 Q6ZTI0 123 aa9.05□□□□□ -0.96
HERC3-203ENST00000407637 RIF1Q5UIP0 2472 aaKnown RBP9.05□□□□□ -0.96
HERC3-203ENST00000407637 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 K7EQG2 157 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 PAX4O43316 350 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 BLCAPP62952 87 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 LY6EQ16553 131 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 COX7B2Q8TF08 81 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
HERC3-203ENST00000407637 ZFHX2Q9C0A1 2572 aaPredicted RBP9.04□□□□□ -0.96
HERC3-203ENST00000407637 K7EMT4 169 aa9.03□□□□□ -0.96
HERC3-203ENST00000407637 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
HERC3-203ENST00000407637 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.96
HERC3-203ENST00000407637 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.96
HERC3-203ENST00000407637 CCL21O00585 134 aa9.02□□□□□ -0.97
HERC3-203ENST00000407637 DEFB124Q8NES8 71 aa9.02□□□□□ -0.97
HERC3-203ENST00000407637 VPS13CQ709C8 3753 aa9.02□□□□□ -0.97
HERC3-203ENST00000407637 ABCA2Q9BZC7 2435 aa9.02□□□□□ -0.97
HERC3-203ENST00000407637 H3BUA1 57 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 CFHR3Q02985 330 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 BRD3OSQ6XYD6 125 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 MPLKIPQ8TAP9 179 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 MUC6Q6W4X9 2439 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 BCE1O60756 84 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 C11orf71Q6IPW1 123 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
HERC3-203ENST00000407637 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
HERC3-203ENST00000407637 NTM-AS1Q6ZSK4 140 aa9□□□□□ -0.97
HERC3-203ENST00000407637 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
HERC3-203ENST00000407637 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 TMEM256-PLSCR3K7ERE1 68 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 LY6G6DO95868 133 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 HAMPP81172 84 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 Q8N814 137 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 Q8NA96 180 aa8.99□□□□□ -0.97
HERC3-203ENST00000407637 M0R2N4 97 aa8.98□□□□□ -0.97
HERC3-203ENST00000407637 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
HERC3-203ENST00000407637 TM2D3Q9BRN9 247 aa8.98□□□□□ -0.97
HERC3-203ENST00000407637 CRYBG3Q68DQ2 2970 aa8.97□□□□□ -0.97
HERC3-203ENST00000407637 CSMD2Q7Z408 3487 aa8.97□□□□□ -0.97
HERC3-203ENST00000407637 A0A096LNT2 108 aa8.97□□□□□ -0.97
HERC3-203ENST00000407637 C11orf68Q9H3H3 251 aaKnown RBP8.97□□□□□ -0.97
HERC3-203ENST00000407637 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
HERC3-203ENST00000407637 CUBNO60494 3623 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 K7EQD1 137 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 NDUFC1O43677 76 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 MIFP14174 115 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
HERC3-203ENST00000407637 Q6ZQT0 140 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 OTOGLQ3ZCN5 2332 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 H3BUX3 64 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 Q6ZVQ6 151 aa8.95□□□□□ -0.98
HERC3-203ENST00000407637 Q8N3U1 123 aa8.94□□□□□ -0.98
HERC3-203ENST00000407637 UBE2L6O14933 153 aa8.94□□□□□ -0.98
HERC3-203ENST00000407637 DEFB131AP59861 70 aa8.94□□□□□ -0.98
HERC3-203ENST00000407637 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
HERC3-203ENST00000407637 C10orf99Q6UWK7 81 aa8.94□□□□□ -0.98
HERC3-203ENST00000407637 ZNF292O60281 2723 aa8.94□□□□□ -0.98
HERC3-203ENST00000407637 PRR3P79522 188 aaKnown RBP8.93□□□□□ -0.98
HERC3-203ENST00000407637 LMO4P61968 165 aa8.93□□□□□ -0.98
HERC3-203ENST00000407637 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
HERC3-203ENST00000407637 IL17DQ8TAD2 202 aa8.92□□□□□ -0.98
HERC3-203ENST00000407637 NOTCH3Q9UM47 2321 aa8.92□□□□□ -0.98
HERC3-203ENST00000407637 ZNF843Q8N446 348 aa8.91□□□□□ -0.98
HERC3-203ENST00000407637 TRGV1A0A0A0MS02 117 aa8.9□□□□□ -0.98
HERC3-203ENST00000407637 A6NDX4 124 aa8.9□□□□□ -0.98
HERC3-203ENST00000407637 NREPQ16612 68 aa8.9□□□□□ -0.98
HERC3-203ENST00000407637 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.98
HERC3-203ENST00000407637 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 C19orf84I3L1E1 186 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 PRB1P04280 392 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 IGHV4-38-2P0DP08 117 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 TMEM89A2RUT3 159 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 LAMTOR3Q9UHA4 124 aa8.89□□□□□ -0.99
HERC3-203ENST00000407637 LOC110117498A0A087WWA1 95 aa8.88□□□□□ -0.99
HERC3-203ENST00000407637 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
HERC3-203ENST00000407637 A0A1W2PPR1 153 aa8.88□□□□□ -0.99
HERC3-203ENST00000407637 MAP1AP78559 2803 aaPredicted RBP8.88□□□□□ -0.99
HERC3-203ENST00000407637 CXCL6P80162 114 aa8.88□□□□□ -0.99
HERC3-203ENST00000407637 ESRGQ1W209 222 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms