RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 COX6CP09669 75 aa11.81□□□□□ -0.52
CDK11B-204ENST00000407249 Q6ZSV7 163 aa11.81□□□□□ -0.52
CDK11B-204ENST00000407249 PRR15Q8IV56 129 aa11.81□□□□□ -0.52
CDK11B-204ENST00000407249 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
CDK11B-204ENST00000407249 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
CDK11B-204ENST00000407249 COPS9Q8WXC6 57 aa11.8□□□□□ -0.52
CDK11B-204ENST00000407249 Q9UF83 564 aa11.8□□□□□ -0.52
CDK11B-204ENST00000407249 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
CDK11B-204ENST00000407249 HTN1P15515 57 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 TMEM61Q8N0U2 210 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 FBN2P35556 2912 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
CDK11B-204ENST00000407249 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
CDK11B-204ENST00000407249 SS18Q15532 418 aa11.78□□□□□ -0.52
CDK11B-204ENST00000407249 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
CDK11B-204ENST00000407249 CLEC2BQ92478 149 aa11.78□□□□□ -0.52
CDK11B-204ENST00000407249 LST1O00453 97 aa11.77□□□□□ -0.52
CDK11B-204ENST00000407249 HILS1P60008 231 aa11.77□□□□□ -0.52
CDK11B-204ENST00000407249 LRRK2Q5S007 2527 aa11.77□□□□□ -0.53
CDK11B-204ENST00000407249 MRPL55Q7Z7F7 128 aaKnown RBP11.77□□□□□ -0.53
CDK11B-204ENST00000407249 CRYBG3Q68DQ2 2970 aa11.76□□□□□ -0.53
CDK11B-204ENST00000407249 Q6ZSN1 163 aa11.76□□□□□ -0.53
CDK11B-204ENST00000407249 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
CDK11B-204ENST00000407249 CIRBPQ14011 172 aaKnown RBP11.76□□□□□ -0.53
CDK11B-204ENST00000407249 C4orf3Q8WVX3 66 aa11.76□□□□□ -0.53
CDK11B-204ENST00000407249 TIMM17BO60830 172 aa11.75□□□□□ -0.53
CDK11B-204ENST00000407249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
CDK11B-204ENST00000407249 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
CDK11B-204ENST00000407249 PAX4O43316 350 aa11.75□□□□□ -0.53
CDK11B-204ENST00000407249 PRM2P04554 102 aa11.74□□□□□ -0.53
CDK11B-204ENST00000407249 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
CDK11B-204ENST00000407249 LAMTOR3Q9UHA4 124 aa11.74□□□□□ -0.53
CDK11B-204ENST00000407249 DAND5Q8N907 189 aa11.73□□□□□ -0.53
CDK11B-204ENST00000407249 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
CDK11B-204ENST00000407249 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
CDK11B-204ENST00000407249 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
CDK11B-204ENST00000407249 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
CDK11B-204ENST00000407249 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
CDK11B-204ENST00000407249 PIK3CD-AS1Q5SR53 167 aa11.73□□□□□ -0.53
CDK11B-204ENST00000407249 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
CDK11B-204ENST00000407249 CELSR2Q9HCU4 2923 aa11.72□□□□□ -0.53
CDK11B-204ENST00000407249 NDUFA1O15239 70 aa11.72□□□□□ -0.53
CDK11B-204ENST00000407249 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
CDK11B-204ENST00000407249 NACAE9PAV3 2078 aa11.71□□□□□ -0.53
CDK11B-204ENST00000407249 IGLV5-45A0A087WSX0 123 aa11.71□□□□□ -0.53
CDK11B-204ENST00000407249 DNAJC9-AS1A6NH13 148 aa11.71□□□□□ -0.53
CDK11B-204ENST00000407249 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.71□□□□□ -0.53
CDK11B-204ENST00000407249 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.54
CDK11B-204ENST00000407249 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.54
CDK11B-204ENST00000407249 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
CDK11B-204ENST00000407249 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
CDK11B-204ENST00000407249 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
CDK11B-204ENST00000407249 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
CDK11B-204ENST00000407249 A8MTW9 85 aa11.7□□□□□ -0.54
CDK11B-204ENST00000407249 H7BZZ5 65 aa11.7□□□□□ -0.54
CDK11B-204ENST00000407249 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
CDK11B-204ENST00000407249 DEFB131AP59861 70 aa11.7□□□□□ -0.54
CDK11B-204ENST00000407249 USP9YO00507 2555 aaPredicted RBP11.69□□□□□ -0.54
CDK11B-204ENST00000407249 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
CDK11B-204ENST00000407249 XCL1P47992 114 aa11.69□□□□□ -0.54
CDK11B-204ENST00000407249 SLURP1P55000 103 aa11.69□□□□□ -0.54
CDK11B-204ENST00000407249 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
CDK11B-204ENST00000407249 TRBV7-6A0A0J9YX20 115 aa11.68□□□□□ -0.54
CDK11B-204ENST00000407249 CCKP06307 115 aa11.68□□□□□ -0.54
CDK11B-204ENST00000407249 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
CDK11B-204ENST00000407249 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
CDK11B-204ENST00000407249 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
CDK11B-204ENST00000407249 HIST2H2BCQ6DN03 193 aa11.67□□□□□ -0.54
CDK11B-204ENST00000407249 LINC00308Q8TCZ7 52 aa11.67□□□□□ -0.54
CDK11B-204ENST00000407249 COX6A2Q02221 97 aa11.67□□□□□ -0.54
CDK11B-204ENST00000407249 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 Q6JHZ5 121 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 POLQO75417 2590 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 C20orf197Q8N268 126 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 Q9H8V8 135 aa11.66□□□□□ -0.54
CDK11B-204ENST00000407249 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
CDK11B-204ENST00000407249 DEFB136Q30KP8 78 aa11.65□□□□□ -0.54
CDK11B-204ENST00000407249 C18orf65Q6ZTR6 163 aa11.65□□□□□ -0.54
CDK11B-204ENST00000407249 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
CDK11B-204ENST00000407249 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
CDK11B-204ENST00000407249 COX7A2LO14548 114 aa11.64□□□□□ -0.55
CDK11B-204ENST00000407249 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
CDK11B-204ENST00000407249 DYNLRB2Q8TF09 96 aa11.64□□□□□ -0.55
CDK11B-204ENST00000407249 A0A087WVE0 104 aa11.63□□□□□ -0.55
CDK11B-204ENST00000407249 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
CDK11B-204ENST00000407249 CHD6Q8TD26 2715 aa11.63□□□□□ -0.55
CDK11B-204ENST00000407249 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
CDK11B-204ENST00000407249 SOSTDC1Q6X4U4 206 aa11.62□□□□□ -0.55
CDK11B-204ENST00000407249 RBM12B-AS1Q9P1G2 102 aa11.62□□□□□ -0.55
CDK11B-204ENST00000407249 H3BS24 57 aa11.62□□□□□ -0.55
CDK11B-204ENST00000407249 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
CDK11B-204ENST00000407249 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
CDK11B-204ENST00000407249 RBM3P98179 157 aaKnown RBP11.6□□□□□ -0.55
CDK11B-204ENST00000407249 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
CDK11B-204ENST00000407249 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
CDK11B-204ENST00000407249 APCP25054 2843 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms