RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 IGKCP01834 107 aa14.77□□□□□ -0.04
EPCAM-202ENST00000405271 GEMIN7Q9H840 131 aaKnown RBP14.77□□□□□ -0.04
EPCAM-202ENST00000405271 EPPK1P58107 5090 aaKnown RBP14.77□□□□□ -0.04
EPCAM-202ENST00000405271 C11orf86A6NJI1 115 aa14.76□□□□□ -0.05
EPCAM-202ENST00000405271 CHCHD10Q8WYQ3 142 aaPredicted RBP14.76□□□□□ -0.05
EPCAM-202ENST00000405271 KRTAP1-5Q9BYS1 174 aa14.76□□□□□ -0.05
EPCAM-202ENST00000405271 RMI2Q96E14 147 aa14.75□□□□□ -0.05
EPCAM-202ENST00000405271 IGLV10-54A0A075B6I4 117 aa14.74□□□□□ -0.05
EPCAM-202ENST00000405271 IGLV5-45A0A087WSX0 123 aa14.74□□□□□ -0.05
EPCAM-202ENST00000405271 C1orf43Q9BWL3 253 aa14.74□□□□□ -0.05
EPCAM-202ENST00000405271 PYY3Q5JQD4 70 aa14.73□□□□□ -0.05
EPCAM-202ENST00000405271 CD164L2Q6UWJ8 174 aa14.73□□□□□ -0.05
EPCAM-202ENST00000405271 Q9HAA7 133 aa14.73□□□□□ -0.05
EPCAM-202ENST00000405271 XCL1P47992 114 aa14.72□□□□□ -0.05
EPCAM-202ENST00000405271 ZNF22P17026 224 aaPredicted RBP14.71□□□□□ -0.05
EPCAM-202ENST00000405271 COX6A2Q02221 97 aa14.71□□□□□ -0.05
EPCAM-202ENST00000405271 IGHV3OR16-9A0A0B4J2B5 98 aa14.71□□□□□ -0.06
EPCAM-202ENST00000405271 LINC00469Q8N7U9 141 aa14.71□□□□□ -0.06
EPCAM-202ENST00000405271 IGKV2D-24A0A075B6R9 120 aa14.7□□□□□ -0.06
EPCAM-202ENST00000405271 H3BRM9 83 aa14.7□□□□□ -0.06
EPCAM-202ENST00000405271 TMEM170BQ5T4T1 132 aa14.7□□□□□ -0.06
EPCAM-202ENST00000405271 GAGE12HA6NDE8 117 aa14.69□□□□□ -0.06
EPCAM-202ENST00000405271 CDKN2A-AS1Q9UH64 79 aa14.69□□□□□ -0.06
EPCAM-202ENST00000405271 COX11Q9Y6N1 276 aa14.69□□□□□ -0.06
EPCAM-202ENST00000405271 FRAS1Q86XX4 4008 aa14.68□□□□□ -0.06
EPCAM-202ENST00000405271 SMIM6P0DI80 62 aa14.68□□□□□ -0.06
EPCAM-202ENST00000405271 FOXI1Q12951 378 aa14.68□□□□□ -0.06
EPCAM-202ENST00000405271 Q6ZR54 194 aa14.68□□□□□ -0.06
EPCAM-202ENST00000405271 ATOH7Q8N100 152 aa14.68□□□□□ -0.06
EPCAM-202ENST00000405271 KRTAP26-1Q6PEX3 210 aa14.67□□□□□ -0.06
EPCAM-202ENST00000405271 A0A087WZ39 114 aa14.66□□□□□ -0.06
EPCAM-202ENST00000405271 LINC01561Q8N1V8 128 aa14.66□□□□□ -0.06
EPCAM-202ENST00000405271 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
EPCAM-202ENST00000405271 COX7A2LO14548 114 aa14.66□□□□□ -0.06
EPCAM-202ENST00000405271 TMEM223A0PJW6 202 aa14.65□□□□□ -0.06
EPCAM-202ENST00000405271 M0R2N4 97 aa14.65□□□□□ -0.06
EPCAM-202ENST00000405271 HERVK_113P61574 105 aa14.65□□□□□ -0.06
EPCAM-202ENST00000405271 C5orf38Q86SI9 138 aa14.64□□□□□ -0.07
EPCAM-202ENST00000405271 DNAH6Q9C0G6 4158 aa14.64□□□□□ -0.07
EPCAM-202ENST00000405271 HSBP1L1C9JCN9 74 aa14.63□□□□□ -0.07
EPCAM-202ENST00000405271 hDV102S1A0JD36 115 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 MALP21145 153 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 DNAH10Q8IVF4 4471 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 APOMO95445 188 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 SPINK8P0C7L1 97 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 VAMP8Q9BV40 100 aa14.61□□□□□ -0.07
EPCAM-202ENST00000405271 C6orf223Q8N319 242 aa14.6□□□□□ -0.07
EPCAM-202ENST00000405271 STPG4Q8N801 248 aa14.6□□□□□ -0.07
EPCAM-202ENST00000405271 IGHV1-58A0A0C4DH39 117 aa14.59□□□□□ -0.07
EPCAM-202ENST00000405271 E9PLD3 99 aa14.59□□□□□ -0.07
EPCAM-202ENST00000405271 CDPF1Q6NVV7 123 aa14.59□□□□□ -0.07
EPCAM-202ENST00000405271 PSCAO43653 123 aa14.58□□□□□ -0.08
EPCAM-202ENST00000405271 IGLV5-39A0A0G2JS06 123 aa14.57□□□□□ -0.08
EPCAM-202ENST00000405271 MAJINQ3KP22 176 aa14.57□□□□□ -0.08
EPCAM-202ENST00000405271 Q6ZRN7 208 aaPredicted RBP14.57□□□□□ -0.08
EPCAM-202ENST00000405271 IGHV3-64A0A075B6Q5 118 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 S100A12P80511 92 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 ANKRD39Q53RE8 183 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 LEPROTO15243 131 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 C1orf134Q5TEV5 83 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 PLEKHB2Q96CS7 222 aa14.56□□□□□ -0.08
EPCAM-202ENST00000405271 BIRC6Q9NR09 4857 aa14.55□□□□□ -0.08
EPCAM-202ENST00000405271 CFAP161Q6P656 301 aa14.55□□□□□ -0.08
EPCAM-202ENST00000405271 MAPKAPK5-AS1Q8N8E1 139 aa14.55□□□□□ -0.08
EPCAM-202ENST00000405271 ORAOV1Q8WV07 137 aa14.55□□□□□ -0.08
EPCAM-202ENST00000405271 PAM16Q9Y3D7 125 aa14.55□□□□□ -0.08
EPCAM-202ENST00000405271 DNAH2Q9P225 4427 aa14.54□□□□□ -0.08
EPCAM-202ENST00000405271 SPATA45Q537H7 98 aa14.53□□□□□ -0.08
EPCAM-202ENST00000405271 Q8IZM0 81 aa14.52□□□□□ -0.08
EPCAM-202ENST00000405271 C15orf56Q8N910 161 aa14.52□□□□□ -0.08
EPCAM-202ENST00000405271 COX7B2Q8TF08 81 aa14.52□□□□□ -0.08
EPCAM-202ENST00000405271 IGKV2D-26A0A0A0MRZ7 120 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 C12orf57Q99622 126 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 USP17L23D6RBM5 183 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 J3QQQ9 107 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 PRSS2P07478 247 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 LGALS3P17931 250 aaKnown RBP14.51□□□□□ -0.09
EPCAM-202ENST00000405271 NMUP48645 174 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 SPAG11BQ08648 103 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 TOMM7Q9P0U1 55 aa14.51□□□□□ -0.09
EPCAM-202ENST00000405271 GVQW2A0A096LPI5 108 aaPredicted RBP14.5□□□□□ -0.09
EPCAM-202ENST00000405271 TSPEAR-AS2P59090 65 aa14.49□□□□□ -0.09
EPCAM-202ENST00000405271 LINC00518Q8N0U6 118 aa14.49□□□□□ -0.09
EPCAM-202ENST00000405271 CXCL5P42830 114 aa14.48□□□□□ -0.09
EPCAM-202ENST00000405271 KIAA0087Q14695 138 aa14.47□□□□□ -0.09
EPCAM-202ENST00000405271 ZNF561-AS1K7EIQ3 104 aa14.46□□□□□ -0.09
EPCAM-202ENST00000405271 C14orf177Q52M58 125 aa14.46□□□□□ -0.09
EPCAM-202ENST00000405271 C6orf226Q5I0X4 101 aa14.46□□□□□ -0.09
EPCAM-202ENST00000405271 SFTA2Q6UW10 78 aa14.46□□□□□ -0.09
EPCAM-202ENST00000405271 FAT2Q9NYQ8 4349 aa14.46□□□□□ -0.09
EPCAM-202ENST00000405271 RTL8CO15255 209 aa14.46□□□□□ -0.1
EPCAM-202ENST00000405271 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.1
EPCAM-202ENST00000405271 HECTD4Q9Y4D8 3996 aa14.45□□□□□ -0.1
EPCAM-202ENST00000405271 LRCOL1A6NCL2 159 aa14.45□□□□□ -0.1
EPCAM-202ENST00000405271 F8WDY8 70 aa14.45□□□□□ -0.1
EPCAM-202ENST00000405271 LINC00336Q6ZUF6 198 aa14.45□□□□□ -0.1
EPCAM-202ENST00000405271 LECT2O14960 151 aa14.44□□□□□ -0.1
EPCAM-202ENST00000405271 NDUFA1O15239 70 aa14.44□□□□□ -0.1
EPCAM-202ENST00000405271 COX8AP10176 69 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms