RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NOP10Q9NPE3 64 aaKnown RBP18.19■□□□□ 0.5
COL13A1-203ENST00000398969 F5H768 121 aa18.18■□□□□ 0.5
COL13A1-203ENST00000398969 SOSTDC1Q6X4U4 206 aa18.18■□□□□ 0.5
COL13A1-203ENST00000398969 LINC01006Q8NI28 216 aa18.18■□□□□ 0.5
COL13A1-203ENST00000398969 NOTCH2Q04721 2471 aa18.17■□□□□ 0.5
COL13A1-203ENST00000398969 C16orf95Q9H693 158 aa18.17■□□□□ 0.5
COL13A1-203ENST00000398969 PRIMA1Q86XR5 153 aa18.16■□□□□ 0.5
COL13A1-203ENST00000398969 GIG44P09565 113 aaPredicted RBP18.16■□□□□ 0.5
COL13A1-203ENST00000398969 HILS1P60008 231 aa18.16■□□□□ 0.5
COL13A1-203ENST00000398969 SNCGO76070 127 aa18.15■□□□□ 0.5
COL13A1-203ENST00000398969 HIVEP2P31629 2446 aa18.15■□□□□ 0.5
COL13A1-203ENST00000398969 COPS9Q8WXC6 57 aa18.15■□□□□ 0.5
COL13A1-203ENST00000398969 CRLF1O75462 422 aa18.14■□□□□ 0.49
COL13A1-203ENST00000398969 MEIG1Q5JSS6 88 aa18.14■□□□□ 0.49
COL13A1-203ENST00000398969 TRAV26-1A0A087WT03 109 aa18.13■□□□□ 0.49
COL13A1-203ENST00000398969 PLAC8L1A1L4L8 177 aa18.13■□□□□ 0.49
COL13A1-203ENST00000398969 TMEM243Q9BU79 118 aa18.13■□□□□ 0.49
COL13A1-203ENST00000398969 LY6G6DO95868 133 aa18.12■□□□□ 0.49
COL13A1-203ENST00000398969 WNK1Q9H4A3 2382 aa18.12■□□□□ 0.49
COL13A1-203ENST00000398969 UBE2L6O14933 153 aa18.12■□□□□ 0.49
COL13A1-203ENST00000398969 HERV-K104P63124 156 aa18.11■□□□□ 0.49
COL13A1-203ENST00000398969 C16orf74Q96GX8 76 aa18.11■□□□□ 0.49
COL13A1-203ENST00000398969 COX7A2LO14548 114 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 DEFB121Q5J5C9 76 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 SHISA2Q6UWI4 295 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 WFDC10AQ9H1F0 79 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE7O76087 117 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE12FP0CL80 117 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE12GP0CL81 117 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE12IP0CL82 117 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE2BQ13066 116 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE2EQ4V326 116 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 ANAPC13Q9BS18 74 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 GAGE2DQ9UEU5 116 aa18.1■□□□□ 0.49
COL13A1-203ENST00000398969 LOC100131303A0A0U1RQF7 123 aa18.09■□□□□ 0.49
COL13A1-203ENST00000398969 SETD2Q9BYW2 2564 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-203ENST00000398969 TRGV2A0A075B6R0 118 aa18.09■□□□□ 0.49
COL13A1-203ENST00000398969 CMC4P56277 68 aaPredicted RBP18.09■□□□□ 0.49
COL13A1-203ENST00000398969 OTOGQ6ZRI0 2925 aa18.08■□□□□ 0.48
COL13A1-203ENST00000398969 C15orf53Q8NAA6 179 aa18.08■□□□□ 0.48
COL13A1-203ENST00000398969 RPL35AP18077 110 aaKnown RBP18.06■□□□□ 0.48
COL13A1-203ENST00000398969 TRBV6-4A0A1B0GX49 114 aa18.06■□□□□ 0.48
COL13A1-203ENST00000398969 FAM240AA0A1B0GVK7 77 aa18.05■□□□□ 0.48
COL13A1-203ENST00000398969 PPDPFQ9H3Y8 114 aa18.05■□□□□ 0.48
COL13A1-203ENST00000398969 C19orf73Q9NVV2 129 aa18.05■□□□□ 0.48
COL13A1-203ENST00000398969 Q6Q795 121 aa18.03■□□□□ 0.48
COL13A1-203ENST00000398969 OVOL2Q9BRP0 275 aa18.03■□□□□ 0.48
COL13A1-203ENST00000398969 CSNK1G2-AS1Q8NCQ2 148 aa18.03■□□□□ 0.48
COL13A1-203ENST00000398969 FAM110AQ9BQ89 295 aa18.02■□□□□ 0.48
COL13A1-203ENST00000398969 IGLV1-51P01701 117 aa18.02■□□□□ 0.47
COL13A1-203ENST00000398969 TRGV4A0A0C4DH28 118 aa18.01■□□□□ 0.47
COL13A1-203ENST00000398969 NHLRC4P0CG21 123 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-203ENST00000398969 GAGE6Q13070 117 aa18.01■□□□□ 0.47
COL13A1-203ENST00000398969 NDUFV3P56181 108 aaKnown RBP18■□□□□ 0.47
COL13A1-203ENST00000398969 MRPL23Q16540 153 aaKnown RBP18■□□□□ 0.47
COL13A1-203ENST00000398969 COX7B2Q8TF08 81 aa18■□□□□ 0.47
COL13A1-203ENST00000398969 SETXQ7Z333 2677 aaKnown RBP18■□□□□ 0.47
COL13A1-203ENST00000398969 TTC32Q5I0X7 151 aa17.99■□□□□ 0.47
COL13A1-203ENST00000398969 NOTCH3Q9UM47 2321 aa17.98■□□□□ 0.47
COL13A1-203ENST00000398969 TRACP01848 142 aa17.97■□□□□ 0.47
COL13A1-203ENST00000398969 IGLV4-60A0A075B6I1 120 aa17.97■□□□□ 0.47
COL13A1-203ENST00000398969 FHL2Q14192 279 aa17.97■□□□□ 0.47
COL13A1-203ENST00000398969 IGKV3OR2-268A0A0C4DH90 116 aa17.96■□□□□ 0.47
COL13A1-203ENST00000398969 INAFM1C9JVW0 142 aa17.96■□□□□ 0.47
COL13A1-203ENST00000398969 TRBV6-8A0A0A6YYG3 113 aa17.96■□□□□ 0.47
COL13A1-203ENST00000398969 MIR7-3HGQ8N6C7 128 aa17.95■□□□□ 0.46
COL13A1-203ENST00000398969 TOMM7Q9P0U1 55 aa17.95■□□□□ 0.46
COL13A1-203ENST00000398969 C2CD3Q4AC94 2353 aa17.95■□□□□ 0.46
COL13A1-203ENST00000398969 FAM218AQ96MZ4 157 aa17.95■□□□□ 0.46
COL13A1-203ENST00000398969 NIPBLQ6KC79 2804 aaeCLIP17.94■□□□□ 0.46
COL13A1-203ENST00000398969 TRAV13-2A0A0B4J235 113 aa17.93■□□□□ 0.46
COL13A1-203ENST00000398969 PF4P02776 101 aa17.93■□□□□ 0.46
COL13A1-203ENST00000398969 FAM222AQ5U5X8 452 aa17.93■□□□□ 0.46
COL13A1-203ENST00000398969 JMJD1CQ15652 2540 aa17.93■□□□□ 0.46
COL13A1-203ENST00000398969 IGHV3OR16-9A0A0B4J2B5 98 aa17.92■□□□□ 0.46
COL13A1-203ENST00000398969 CHCHD5Q9BSY4 110 aa17.92■□□□□ 0.46
COL13A1-203ENST00000398969 CRPP02741 224 aa17.91■□□□□ 0.46
COL13A1-203ENST00000398969 RPL28P46779 137 aaKnown RBP17.91■□□□□ 0.46
COL13A1-203ENST00000398969 LINC00337Q8N6G1 96 aa17.91■□□□□ 0.46
COL13A1-203ENST00000398969 SND1-IT1Q9HBX3 110 aa17.91■□□□□ 0.46
COL13A1-203ENST00000398969 IGKV2-28A0A075B6P5 120 aa17.9■□□□□ 0.46
COL13A1-203ENST00000398969 IGKV2D-28P01615 120 aa17.9■□□□□ 0.46
COL13A1-203ENST00000398969 BAALC-AS2P0C853 105 aa17.9■□□□□ 0.46
COL13A1-203ENST00000398969 NSD1Q96L73 2696 aaPredicted RBP17.89■□□□□ 0.45
COL13A1-203ENST00000398969 ACYP1P07311 99 aa17.88■□□□□ 0.45
COL13A1-203ENST00000398969 KRTAP10-3P60369 221 aa17.88■□□□□ 0.45
COL13A1-203ENST00000398969 C22orf24Q9Y442 160 aa17.88■□□□□ 0.45
COL13A1-203ENST00000398969 LINC00158P58513 81 aa17.88■□□□□ 0.45
COL13A1-203ENST00000398969 A0A087WZ39 114 aa17.87■□□□□ 0.45
COL13A1-203ENST00000398969 HIVEP1P15822 2718 aa17.87■□□□□ 0.45
COL13A1-203ENST00000398969 FN1P02751 2386 aaKnown RBP17.85■□□□□ 0.45
COL13A1-203ENST00000398969 TRBV7-7A0A0K0K1E9 115 aa17.84■□□□□ 0.45
COL13A1-203ENST00000398969 CCL18P55774 89 aa17.84■□□□□ 0.45
COL13A1-203ENST00000398969 C5orf38Q86SI9 138 aa17.84■□□□□ 0.45
COL13A1-203ENST00000398969 IBA57-AS1B1ANH7 110 aa17.84■□□□□ 0.45
COL13A1-203ENST00000398969 DEFB130BP0DP73 79 aa17.83■□□□□ 0.44
COL13A1-203ENST00000398969 DEFB130AP0DP74 79 aa17.83■□□□□ 0.44
COL13A1-203ENST00000398969 Q9HAA7 133 aa17.83■□□□□ 0.44
COL13A1-203ENST00000398969 LINC00959A0A1B0GUT2 108 aa17.82■□□□□ 0.44
COL13A1-203ENST00000398969 SMIM11BQ8TCY0 68 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms