RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 TRAV13-2A0A0B4J235 113 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 TRAV40A0A0B4J280 105 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 IGHV1-69DA0A0B4J2H0 117 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 C15orf32Q32M92 178 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 IGHV3OR16-8A0A075B7F1 116 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 ESRGQ1W209 222 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 C20orf197Q8N268 126 aa4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 ITLN2Q8WWU7 325 aaPredicted RBP4.8□□□□□ -1.64
TM9SF4-202ENST00000398022 F8W735 103 aaPredicted RBP4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 IGHV4-39P01824 125 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 RNASE4P34096 147 aaKnown RBP4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 NDPQ00604 133 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 KIAA0087Q14695 138 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 ATP11AUNQ6ZP68 121 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 MRPL35Q9NZE8 188 aaKnown RBP4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 FBXL19-AS1Q494R0 122 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 NDUFA11Q86Y39 141 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 SMAD5-AS1Q9Y6J3 95 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 Q6ZSV7 163 aa4.79□□□□□ -1.64
TM9SF4-202ENST00000398022 TLN2Q9Y4G6 2542 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 ARHGAP32A7KAX9 2087 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.78□□□□□ -1.643e-8■■□□□ 14.2
TM9SF4-202ENST00000398022 MED13LQ71F56 2210 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 IGKV2D-26A0A0A0MRZ7 120 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 IGHV7-81A0A0B4J1V7 117 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 BCE1O60756 84 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 Q1T7F1 81 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 KLK15Q9H2R5 256 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 ZANQ9Y493 2812 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 HIVEP2P31629 2446 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 PPP1R17O96001 155 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 SOSTDC1Q6X4U4 206 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 SCGB3A1Q96QR1 104 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 FAM223BA6NKX1 122 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 F8VRH5 84 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 Q8N6K4 173 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 CLEC2BQ92478 149 aa4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 SETD2Q9BYW2 2564 aaPredicted RBP4.78□□□□□ -1.64
TM9SF4-202ENST00000398022 TRAV12-1A0A0B4J245 112 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV3-66A0A0C4DH42 116 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 PRM2P04554 102 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 SMIM2Q9BVW6 85 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 LENEPQ9Y5L5 61 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV3OR16-13A0A075B7E8 117 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV3-74A0A0B4J1X5 117 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 A6NN06 94 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 NACAE9PAV3 2078 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 LY6HO94772 140 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 C9orf47Q6ZRZ4 202 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 Q8N9W7 124 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 PHLDA3Q9Y5J5 127 aa4.77□□□□□ -1.65
TM9SF4-202ENST00000398022 TRAV21A0A0B4J279 112 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 TRGV3P03979 118 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 LMO4P61968 165 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 Q6JHZ5 121 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 ACANP16112 2415 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 IGLV2-18A0A075B6J9 118 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV4-4A0A075B6R2 117 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 ATP6V0E1O15342 81 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 GAS8-AS1O95177 125 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 CHCHD10Q8WYQ3 142 aaPredicted RBP4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV3-49A0A0A0MS15 119 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 NRACQ8N912 160 aa4.76□□□□□ -1.65
TM9SF4-202ENST00000398022 NOTCH3Q9UM47 2321 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 LINC00528Q8N1L1 170 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 NSD1Q96L73 2696 aaPredicted RBP4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 MGPP08493 103 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 MAP1AP78559 2803 aaPredicted RBP4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 IGHV7-4-1A0A0J9YVY3 117 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 PRSS2P07478 247 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 PLA2G2DQ9UNK4 145 aa4.75□□□□□ -1.65
TM9SF4-202ENST00000398022 DAND5Q8N907 189 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 DYNLRB2Q8TF09 96 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 BPESC1Q9GZL8 116 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 PRRC2AP48634 2157 aaKnown RBP4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 REG3AQ06141 175 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 F8WEM9 126 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 C2orf66Q6UXQ4 117 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 SCXQ7RTU7 201 aa4.74□□□□□ -1.65
TM9SF4-202ENST00000398022 CLPSL1A2RUU4 121 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 G3V318 75 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 CD28P10747 220 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 KLK9Q2XQG4 91 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 KLK9Q9UKQ9 250 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 C19orf84I3L1E1 186 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 KRTAP1-3Q8IUG1 177 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms