RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 IGSF10Q6WRI0 2623 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 NREPQ16612 68 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPRD-205ENST00000397611 NKAPP1Q8N9T2 125 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 ATP5EP2Q5VTU8 51 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 IGLV10-54A0A075B6I4 117 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 TSHBP01222 138 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 BEAN1Q3B7T3 259 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 Q6JHZ5 121 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 RNF223E7ERA6 249 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 FSHBP01225 129 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 TMEM256-PLSCR3K7ERE1 68 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 ANGP03950 147 aaKnown RBP4□□□□□ -1.77
PTPRD-205ENST00000397611 LINC01548A6NM66 108 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 IGHV4-61A0A0C4DH41 118 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 WDFY4Q6ZS81 3184 aa4□□□□□ -1.77
PTPRD-205ENST00000397611 NDUFA1O15239 70 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 PRUNE2Q8WUY3 3088 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 FN1P02751 2386 aaKnown RBP3.99□□□□□ -1.77
PTPRD-205ENST00000397611 DEFB136Q30KP8 78 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 FAM222AQ5U5X8 452 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
PTPRD-205ENST00000397611 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 ITPR3Q14573 2671 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 ACANP16112 2415 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 PROK1P58294 105 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 UBE2DNLQ8IWF7 75 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 BLCAPP62952 87 aa3.99□□□□□ -1.77
PTPRD-205ENST00000397611 FREM2Q5SZK8 3169 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 SOSTDC1Q6X4U4 206 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 IL17DQ8TAD2 202 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 USP24Q9UPU5 2620 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 MP68P56378 58 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 KIR2DL5BQ8NHK3 375 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 SLURP1P55000 103 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 Q8N2B8 174 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 MAPK1IP1LQ8NDC0 245 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
PTPRD-205ENST00000397611 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
PTPRD-205ENST00000397611 CDSNQ15517 529 aa3.97□□□□□ -1.77
PTPRD-205ENST00000397611 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
PTPRD-205ENST00000397611 ADAMTSL4-AS1Q5T5F5 129 aa3.97□□□□□ -1.77
PTPRD-205ENST00000397611 TRBV7-7A0A0K0K1E9 115 aa3.97□□□□□ -1.77
PTPRD-205ENST00000397611 FLNAP21333 2647 aaKnown RBP3.97□□□□□ -1.77
PTPRD-205ENST00000397611 MAP1AP78559 2803 aaPredicted RBP3.96□□□□□ -1.77
PTPRD-205ENST00000397611 CFAP54Q96N23 3096 aa3.96□□□□□ -1.77
PTPRD-205ENST00000397611 PRR4Q16378 134 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 IGHV4-38-2P0DP08 117 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 Q96MF0 132 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 FASNP49327 2511 aaKnown RBP3.96□□□□□ -1.78
PTPRD-205ENST00000397611 NDUFS5O43920 106 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 IGHV4-59P01825 116 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 MUC7Q8TAX7 377 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 A0A087WYN8 130 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 LRCOL1A6NCL2 159 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 DIRC1Q969H9 104 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 MUC4Q99102 2169 aa3.96□□□□□ -1.78
PTPRD-205ENST00000397611 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
PTPRD-205ENST00000397611 GYPEP15421 78 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 GCN1Q92616 2671 aaKnown RBP3.95□□□□□ -1.78
PTPRD-205ENST00000397611 FHL3Q13643 280 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 DEFB113Q30KQ7 82 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 LITAFQ99732 161 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 BPY2O14599 106 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-205ENST00000397611 UBE2D4Q9Y2X8 147 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 CDH23Q9H251 3354 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 RETNQ9HD89 108 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 ESM1Q9NQ30 184 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 FRYQ5TBA9 3013 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 COX7BP24311 80 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 RMI2Q96E14 147 aa3.95□□□□□ -1.78
PTPRD-205ENST00000397611 PDE6GP18545 87 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 MIFP14174 115 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 HILS1P60008 231 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 SEC61GP60059 68 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 DEFB112Q30KQ8 113 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 CAMK2N2Q96S95 79 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 CCKP06307 115 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 C16orf74Q96GX8 76 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 FRYLO94915 3013 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 A0A096LNT2 108 aa3.94□□□□□ -1.78
PTPRD-205ENST00000397611 UBE2BP63146 152 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 C6orf99Q4VX62 202 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 SZT2Q5T011 3432 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 Q6ZTI0 123 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 NDUFC1O43677 76 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 H3BQ85 93 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 ETDCA0A1B0GVM5 59 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
PTPRD-205ENST00000397611 ITPR1Q14643 2758 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms