RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 HERVK_113P63121 156 aa14.27□□□□□ -0.13
CPNE1-204ENST00000397443 DNAH1Q9P2D7 4330 aa14.26□□□□□ -0.13
CPNE1-204ENST00000397443 TRAV9-2A0A087WT02 112 aa14.26□□□□□ -0.13
CPNE1-204ENST00000397443 SEC11AP67812 179 aa14.26□□□□□ -0.13
CPNE1-204ENST00000397443 LINC00518Q8N0U6 118 aa14.26□□□□□ -0.13
CPNE1-204ENST00000397443 HSBP1L1C9JCN9 74 aa14.25□□□□□ -0.13
CPNE1-204ENST00000397443 KRTAP1-5Q9BYS1 174 aa14.25□□□□□ -0.13
CPNE1-204ENST00000397443 S100A12P80511 92 aa14.25□□□□□ -0.13
CPNE1-204ENST00000397443 FAM19A3Q7Z5A8 133 aa14.25□□□□□ -0.13
CPNE1-204ENST00000397443 C5orf38Q86SI9 138 aa14.25□□□□□ -0.13
CPNE1-204ENST00000397443 LY6G6CO95867 125 aa14.24□□□□□ -0.13
CPNE1-204ENST00000397443 SPINK8P0C7L1 97 aa14.24□□□□□ -0.13
CPNE1-204ENST00000397443 MIAQ16674 131 aa14.24□□□□□ -0.13
CPNE1-204ENST00000397443 C10orf126Q8N4M7 172 aa14.24□□□□□ -0.13
CPNE1-204ENST00000397443 SPATA45Q537H7 98 aa14.23□□□□□ -0.13
CPNE1-204ENST00000397443 ANKRD39Q53RE8 183 aa14.23□□□□□ -0.13
CPNE1-204ENST00000397443 IGKV2D-24A0A075B6R9 120 aa14.23□□□□□ -0.13
CPNE1-204ENST00000397443 GAGE12HA6NDE8 117 aa14.23□□□□□ -0.13
CPNE1-204ENST00000397443 IBA57-AS1B1ANH7 110 aa14.23□□□□□ -0.13
CPNE1-204ENST00000397443 VPS13DQ5THJ4 4388 aa14.22□□□□□ -0.13
CPNE1-204ENST00000397443 TRAV8-3A0A0A6YYJ7 113 aa14.21□□□□□ -0.13
CPNE1-204ENST00000397443 IGHV3OR16-9A0A0B4J2B5 98 aa14.21□□□□□ -0.13
CPNE1-204ENST00000397443 IGLV5-45A0A087WSX0 123 aa14.21□□□□□ -0.14
CPNE1-204ENST00000397443 M0R2N4 97 aa14.21□□□□□ -0.14
CPNE1-204ENST00000397443 CD164L2Q6UWJ8 174 aa14.21□□□□□ -0.14
CPNE1-204ENST00000397443 C1orf43Q9BWL3 253 aa14.21□□□□□ -0.14
CPNE1-204ENST00000397443 TRAV8-4A0A0B4J246 113 aa14.2□□□□□ -0.14
CPNE1-204ENST00000397443 TMEM223A0PJW6 202 aa14.2□□□□□ -0.14
CPNE1-204ENST00000397443 H3BRM9 83 aa14.2□□□□□ -0.14
CPNE1-204ENST00000397443 NMUP48645 174 aa14.19□□□□□ -0.14
CPNE1-204ENST00000397443 IGKV2D-26A0A0A0MRZ7 120 aa14.19□□□□□ -0.14
CPNE1-204ENST00000397443 NBDYA0A0U1RRE5 68 aa14.19□□□□□ -0.14
CPNE1-204ENST00000397443 HERVK_113P61574 105 aa14.19□□□□□ -0.14
CPNE1-204ENST00000397443 FOXI1Q12951 378 aa14.19□□□□□ -0.14
CPNE1-204ENST00000397443 LINC00476Q8WZB0 136 aa14.17□□□□□ -0.14
CPNE1-204ENST00000397443 COX7A2LO14548 114 aa14.17□□□□□ -0.14
CPNE1-204ENST00000397443 KMT2AQ03164 3969 aa14.16□□□□□ -0.14
CPNE1-204ENST00000397443 SMIM1B2RUZ4 78 aa14.16□□□□□ -0.14
CPNE1-204ENST00000397443 MALP21145 153 aa14.16□□□□□ -0.14
CPNE1-204ENST00000397443 TTTY13Q9BZ97 58 aa14.16□□□□□ -0.14
CPNE1-204ENST00000397443 PRO1933Q9H354 126 aa14.16□□□□□ -0.14
CPNE1-204ENST00000397443 A0A087WZ39 114 aa14.15□□□□□ -0.14
CPNE1-204ENST00000397443 C14orf144Q96I85 54 aa14.15□□□□□ -0.14
CPNE1-204ENST00000397443 K7EP13 123 aa14.15□□□□□ -0.14
CPNE1-204ENST00000397443 TTC32Q5I0X7 151 aa14.15□□□□□ -0.14
CPNE1-204ENST00000397443 E9PLD3 99 aa14.14□□□□□ -0.15
CPNE1-204ENST00000397443 KRTAP26-1Q6PEX3 210 aa14.14□□□□□ -0.15
CPNE1-204ENST00000397443 TP73-AS1Q9UF72 201 aa14.14□□□□□ -0.15
CPNE1-204ENST00000397443 TOMM7Q9P0U1 55 aa14.13□□□□□ -0.15
CPNE1-204ENST00000397443 IGHV1-58A0A0C4DH39 117 aa14.13□□□□□ -0.15
CPNE1-204ENST00000397443 TSPEAR-AS2P59090 65 aa14.13□□□□□ -0.15
CPNE1-204ENST00000397443 PCP2Q8IVA1 136 aa14.12□□□□□ -0.15
CPNE1-204ENST00000397443 RMI2Q96E14 147 aa14.11□□□□□ -0.15
CPNE1-204ENST00000397443 LEPROTO15243 131 aa14.1□□□□□ -0.15
CPNE1-204ENST00000397443 J3QQQ9 107 aa14.09□□□□□ -0.15
CPNE1-204ENST00000397443 ORAOV1Q8WV07 137 aa14.09□□□□□ -0.15
CPNE1-204ENST00000397443 ALMS1Q8TCU4 4167 aa14.09□□□□□ -0.15
CPNE1-204ENST00000397443 DNAH10Q8IVF4 4471 aa14.09□□□□□ -0.15
CPNE1-204ENST00000397443 IGLV5-39A0A0G2JS06 123 aa14.09□□□□□ -0.15
CPNE1-204ENST00000397443 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
CPNE1-204ENST00000397443 MAPKAPK5-AS1Q8N8E1 139 aa14.08□□□□□ -0.16
CPNE1-204ENST00000397443 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
CPNE1-204ENST00000397443 LECT2O14960 151 aa14.07□□□□□ -0.16
CPNE1-204ENST00000397443 PSCAO43653 123 aa14.07□□□□□ -0.16
CPNE1-204ENST00000397443 COX7B2Q8TF08 81 aa14.07□□□□□ -0.16
CPNE1-204ENST00000397443 LINC00526Q96FQ7 95 aa14.07□□□□□ -0.16
CPNE1-204ENST00000397443 APOMO95445 188 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 COX8AP10176 69 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 HIGD2BQ4VC39 106 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 ZNF815PA8K554 130 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 PRSS2P07478 247 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
CPNE1-204ENST00000397443 Q6ZR54 194 aa14.04□□□□□ -0.16
CPNE1-204ENST00000397443 C6orf226Q5I0X4 101 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 SLC25A34Q6PIV7 304 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 LINC01561Q8N1V8 128 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 COX11Q9Y6N1 276 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 TSTD3H0UI37 97 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 SPAG11BQ08648 103 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 C15orf56Q8N910 161 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
CPNE1-204ENST00000397443 C6orf223Q8N319 242 aa14.02□□□□□ -0.16
CPNE1-204ENST00000397443 MYMXA0A1B0GTQ4 84 aa14.02□□□□□ -0.17
CPNE1-204ENST00000397443 ZNF625Q96I27 306 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-204ENST00000397443 CFAP161Q6P656 301 aa14.01□□□□□ -0.17
CPNE1-204ENST00000397443 C2orf82Q6UX34 121 aa14.01□□□□□ -0.17
CPNE1-204ENST00000397443 BOD1L2Q8IYS8 172 aa14.01□□□□□ -0.17
CPNE1-204ENST00000397443 USP17L23D6RBM5 183 aa14□□□□□ -0.17
CPNE1-204ENST00000397443 Q8IZM0 81 aa14□□□□□ -0.17
CPNE1-204ENST00000397443 UQCR10Q9UDW1 63 aa14□□□□□ -0.17
CPNE1-204ENST00000397443 PCP4L1A6NKN8 68 aa14□□□□□ -0.17
CPNE1-204ENST00000397443 KIAA0087Q14695 138 aa14□□□□□ -0.17
CPNE1-204ENST00000397443 ZNF561-AS1K7EIQ3 104 aa13.99□□□□□ -0.17
CPNE1-204ENST00000397443 CKS1BP61024 79 aa13.98□□□□□ -0.17
CPNE1-204ENST00000397443 WFDC2Q14508 124 aa13.98□□□□□ -0.17
CPNE1-204ENST00000397443 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
CPNE1-204ENST00000397443 Q6ZRN7 208 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-204ENST00000397443 MIEN1Q9BRT3 115 aa13.98□□□□□ -0.17
CPNE1-204ENST00000397443 HYDINQ4G0P3 5121 aa13.97□□□□□ -0.17
CPNE1-204ENST00000397443 NDUFA1O15239 70 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 302.5 ms