RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 H3BRM9 83 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 HERVK_113P61574 105 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 MIAQ16674 131 aa9.31□□□□□ -0.92
VAPB-202ENST00000395802 NMUP48645 174 aa9.3□□□□□ -0.92
VAPB-202ENST00000395802 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
VAPB-202ENST00000395802 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
VAPB-202ENST00000395802 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
VAPB-202ENST00000395802 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
VAPB-202ENST00000395802 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
VAPB-202ENST00000395802 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
VAPB-202ENST00000395802 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
VAPB-202ENST00000395802 E9PLD3 99 aa9.28□□□□□ -0.92
VAPB-202ENST00000395802 DLEU1O43261 78 aa9.28□□□□□ -0.92
VAPB-202ENST00000395802 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
VAPB-202ENST00000395802 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
VAPB-202ENST00000395802 ZNF22P17026 224 aaPredicted RBP9.27□□□□□ -0.93
VAPB-202ENST00000395802 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
VAPB-202ENST00000395802 CLPSL2Q6UWE3 100 aa9.27□□□□□ -0.93
VAPB-202ENST00000395802 Q8N3U1 123 aa9.27□□□□□ -0.93
VAPB-202ENST00000395802 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
VAPB-202ENST00000395802 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 C2orf91Q6ZV80 131 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 RMI2Q96E14 147 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
VAPB-202ENST00000395802 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
VAPB-202ENST00000395802 XCL1P47992 114 aa9.25□□□□□ -0.93
VAPB-202ENST00000395802 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
VAPB-202ENST00000395802 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
VAPB-202ENST00000395802 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 SNHG12Q9BXW3 62 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 CDKN2A-AS1Q9UH64 79 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 EREGO14944 169 aa9.24□□□□□ -0.93
VAPB-202ENST00000395802 A0A087WZ39 114 aa9.23□□□□□ -0.93
VAPB-202ENST00000395802 COX6A2Q02221 97 aa9.23□□□□□ -0.93
VAPB-202ENST00000395802 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
VAPB-202ENST00000395802 LYSTQ99698 3801 aa9.23□□□□□ -0.93
VAPB-202ENST00000395802 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
VAPB-202ENST00000395802 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
VAPB-202ENST00000395802 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
VAPB-202ENST00000395802 COX7A2LO14548 114 aa9.22□□□□□ -0.93
VAPB-202ENST00000395802 M0R143 59 aa9.21□□□□□ -0.93
VAPB-202ENST00000395802 APOMO95445 188 aa9.21□□□□□ -0.93
VAPB-202ENST00000395802 MALP21145 153 aa9.21□□□□□ -0.93
VAPB-202ENST00000395802 PLEKHB2Q96CS7 222 aa9.21□□□□□ -0.93
VAPB-202ENST00000395802 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.94
VAPB-202ENST00000395802 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
VAPB-202ENST00000395802 IGKV2D-24A0A075B6R9 120 aa9.2□□□□□ -0.94
VAPB-202ENST00000395802 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
VAPB-202ENST00000395802 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
VAPB-202ENST00000395802 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
VAPB-202ENST00000395802 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 LEPROTO15243 131 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 J3QQQ9 107 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 SPINK8P0C7L1 97 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
VAPB-202ENST00000395802 FOXI1Q12951 378 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 Q9HAA7 133 aa9.19□□□□□ -0.94
VAPB-202ENST00000395802 IGHV3-64A0A075B6Q5 118 aa9.18□□□□□ -0.94
VAPB-202ENST00000395802 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
VAPB-202ENST00000395802 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
VAPB-202ENST00000395802 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
VAPB-202ENST00000395802 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
VAPB-202ENST00000395802 LY6G6CO95867 125 aa9.17□□□□□ -0.94
VAPB-202ENST00000395802 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
VAPB-202ENST00000395802 PRSS2P07478 247 aa9.17□□□□□ -0.94
VAPB-202ENST00000395802 LINC00476Q8WZB0 136 aa9.17□□□□□ -0.94
VAPB-202ENST00000395802 BATFQ16520 125 aa9.16□□□□□ -0.94
VAPB-202ENST00000395802 HSD52Q0P140 79 aa9.15□□□□□ -0.94
VAPB-202ENST00000395802 BVES-AS1Q5T3Y7 98 aa9.15□□□□□ -0.94
VAPB-202ENST00000395802 Q8IZM0 81 aa9.15□□□□□ -0.95
VAPB-202ENST00000395802 COX7B2Q8TF08 81 aa9.15□□□□□ -0.95
VAPB-202ENST00000395802 PSCAO43653 123 aa9.14□□□□□ -0.95
VAPB-202ENST00000395802 CXCL5P42830 114 aa9.14□□□□□ -0.95
VAPB-202ENST00000395802 C6orf226Q5I0X4 101 aa9.14□□□□□ -0.95
VAPB-202ENST00000395802 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
VAPB-202ENST00000395802 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
VAPB-202ENST00000395802 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
VAPB-202ENST00000395802 ORAOV1Q8WV07 137 aa9.13□□□□□ -0.95
VAPB-202ENST00000395802 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 A0A1B0GV90 55 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 CKS1BP61024 79 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 HERV-K104P63124 156 aa9.12□□□□□ -0.95
VAPB-202ENST00000395802 NDUFA1O15239 70 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms