RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 VPREB3Q9UKI3 123 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 IGHV4-30-2A0A087WSY4 118 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 TNFRSF13BO14836 293 aaPredicted RBP6.47□□□□□ -1.37
RTN4-206ENST00000394611 INAFM2P0DMQ5 153 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 MALP21145 153 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 PRR3P79522 188 aaKnown RBP6.47□□□□□ -1.37
RTN4-206ENST00000394611 COX6A2Q02221 97 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 J3KT08 172 aa6.46□□□□□ -1.37
RTN4-206ENST00000394611 Q6ZSN1 163 aa6.46□□□□□ -1.37
RTN4-206ENST00000394611 A0A0J9YX75 114 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 RNF223E7ERA6 249 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 LST1O00453 97 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 SRSF2Q01130 221 aaKnown RBP6.46□□□□□ -1.38
RTN4-206ENST00000394611 LENEPQ9Y5L5 61 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 TRBV27A0A0K0K1C4 114 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 Q6ZTI0 123 aa6.46□□□□□ -1.38
RTN4-206ENST00000394611 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
RTN4-206ENST00000394611 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 PDZD2O15018 2839 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
RTN4-206ENST00000394611 C3orf22Q8N5N4 141 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 WFDC10AQ9H1F0 79 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 IGHV4-28A0A0C4DH34 117 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 HILS1P60008 231 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 COPS9Q8WXC6 57 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 TMEM243Q9BU79 118 aa6.45□□□□□ -1.38
RTN4-206ENST00000394611 BRI3O95415 125 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 GHRHP01286 108 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 INSP01308 110 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 COX7B2Q8TF08 81 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 FLNAP21333 2647 aaKnown RBP6.44□□□□□ -1.38
RTN4-206ENST00000394611 COX7A2LO14548 114 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 LINC00643Q86TS7 51 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 ZNF575Q86XF7 245 aa6.44□□□□□ -1.38
RTN4-206ENST00000394611 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 MSMBP08118 114 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 MPLKIPQ8TAP9 179 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
RTN4-206ENST00000394611 SETXQ7Z333 2677 aaKnown RBP6.43□□□□□ -1.38
RTN4-206ENST00000394611 LMO4P61968 165 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 DCANP1Q8TF63 244 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 A8MTW9 85 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 UQCRQO14949 82 aa6.43□□□□□ -1.38
RTN4-206ENST00000394611 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
RTN4-206ENST00000394611 CXCL5P42830 114 aa6.42□□□□□ -1.38
RTN4-206ENST00000394611 Q8N6K4 173 aa6.42□□□□□ -1.38
RTN4-206ENST00000394611 DEFB113Q30KQ7 82 aa6.42□□□□□ -1.38
RTN4-206ENST00000394611 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
RTN4-206ENST00000394611 A0A087WYN8 130 aa6.42□□□□□ -1.38
RTN4-206ENST00000394611 AKAP9Q99996 3911 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 FAM110AQ9BQ89 295 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 ATOX1O00244 68 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 LINC00315P59091 139 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 FAM218AQ96MZ4 157 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
RTN4-206ENST00000394611 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 USP17L23D6RBM5 183 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 DEFB105AQ8NG35 78 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 NBEAL1Q6ZS30 2694 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 AVPP01185 164 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.38
RTN4-206ENST00000394611 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.39
RTN4-206ENST00000394611 UBE2D4Q9Y2X8 147 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 KLLNB2CW77 178 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
RTN4-206ENST00000394611 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 SMIM11BQ8TCY0 68 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
RTN4-206ENST00000394611 KIF25-AS1Q9Y6Z4 181 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 CYSRT1A8MQ03 144 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 B4DSR2 109 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 IGHG2P01859 326 aa6.39□□□□□ -1.39
RTN4-206ENST00000394611 LINC01619G3V211 115 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 PRR4Q16378 134 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
RTN4-206ENST00000394611 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 KRTAP1-3Q8IUG1 177 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
RTN4-206ENST00000394611 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.391e-6■■■□□ 18.2
RTN4-206ENST00000394611 COX7CP15954 63 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 LINC00242Q5T6M2 205 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 Q96MF0 132 aa6.38□□□□□ -1.39
RTN4-206ENST00000394611 ITPR3Q14573 2671 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 AMELXQ99217 191 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 K7EQG2 157 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 ACYP1P07311 99 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 COX8CQ7Z4L0 72 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 PSMB8P28062 276 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 LRRC75A-AS1Q8N1F1 130 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms