RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
POLR2J-202ENST00000393794 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
POLR2J-202ENST00000393794 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
POLR2J-202ENST00000393794 UNQ6190/PRO20217Q6UXQ8 127 aa11.71□□□□□ -0.53
POLR2J-202ENST00000393794 NRACQ8N912 160 aa11.71□□□□□ -0.53
POLR2J-202ENST00000393794 NDUFA1O15239 70 aa11.7□□□□□ -0.54
POLR2J-202ENST00000393794 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
POLR2J-202ENST00000393794 ORAOV1Q8WV07 137 aa11.7□□□□□ -0.54
POLR2J-202ENST00000393794 KIAA0087Q14695 138 aa11.69□□□□□ -0.54
POLR2J-202ENST00000393794 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
POLR2J-202ENST00000393794 A0A1B0GUT8 65 aa11.68□□□□□ -0.54
POLR2J-202ENST00000393794 M0QXV9 152 aa11.68□□□□□ -0.54
POLR2J-202ENST00000393794 ZNF861PO60384 105 aa11.68□□□□□ -0.54
POLR2J-202ENST00000393794 FCER1GP30273 86 aa11.68□□□□□ -0.54
POLR2J-202ENST00000393794 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
POLR2J-202ENST00000393794 FAM74A3Q4VXF1 159 aa11.67□□□□□ -0.54
POLR2J-202ENST00000393794 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
POLR2J-202ENST00000393794 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
POLR2J-202ENST00000393794 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
POLR2J-202ENST00000393794 COMMD7Q86VX2 200 aa11.66□□□□□ -0.54
POLR2J-202ENST00000393794 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
POLR2J-202ENST00000393794 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
POLR2J-202ENST00000393794 TSPAN13O95857 204 aa11.65□□□□□ -0.54
POLR2J-202ENST00000393794 PPP1R17O96001 155 aa11.65□□□□□ -0.54
POLR2J-202ENST00000393794 SRP19P09132 144 aaKnown RBP11.65□□□□□ -0.54
POLR2J-202ENST00000393794 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
POLR2J-202ENST00000393794 A0A087X002 238 aa11.64□□□□□ -0.55
POLR2J-202ENST00000393794 UBE2BP63146 152 aa11.64□□□□□ -0.55
POLR2J-202ENST00000393794 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
POLR2J-202ENST00000393794 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
POLR2J-202ENST00000393794 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
POLR2J-202ENST00000393794 TMEM18Q96B42 140 aa11.62□□□□□ -0.55
POLR2J-202ENST00000393794 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
POLR2J-202ENST00000393794 NDUFC2-KCTD14E9PQ53 114 aa11.61□□□□□ -0.55
POLR2J-202ENST00000393794 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
POLR2J-202ENST00000393794 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
POLR2J-202ENST00000393794 TRBV24-1A0A075B6N3 115 aa11.6□□□□□ -0.55
POLR2J-202ENST00000393794 TMEM218A2RU14 115 aa11.6□□□□□ -0.55
POLR2J-202ENST00000393794 SRSF3P84103 164 aaKnown RBP11.6□□□□□ -0.55
POLR2J-202ENST00000393794 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
POLR2J-202ENST00000393794 C20orf78Q9BR46 151 aa11.59□□□□□ -0.55
POLR2J-202ENST00000393794 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
POLR2J-202ENST00000393794 C9JQL5 133 aa11.58□□□□□ -0.56
POLR2J-202ENST00000393794 NUPR1O60356 82 aa11.58□□□□□ -0.56
POLR2J-202ENST00000393794 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
POLR2J-202ENST00000393794 SEC11CQ9BY50 192 aa11.58□□□□□ -0.56
POLR2J-202ENST00000393794 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
POLR2J-202ENST00000393794 MRPL51Q4U2R6 128 aaKnown RBP11.57□□□□□ -0.56
POLR2J-202ENST00000393794 LINC01551Q86U37 167 aa11.57□□□□□ -0.56
POLR2J-202ENST00000393794 CEBPGP53567 150 aa11.56□□□□□ -0.56
POLR2J-202ENST00000393794 PNRC1Q12796 327 aaPredicted RBP11.56□□□□□ -0.56
POLR2J-202ENST00000393794 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
POLR2J-202ENST00000393794 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
POLR2J-202ENST00000393794 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
POLR2J-202ENST00000393794 F8W036 122 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 TCAPO15273 167 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 RIGQ13278 110 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 C22orf24Q9Y442 160 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 V9GYV3 84 aa11.55□□□□□ -0.56
POLR2J-202ENST00000393794 CRYGAP11844 174 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 HBBP68871 147 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 TPRXLQ17RH7 258 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 C10orf91Q5T1B1 145 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 SLC7A5P1Q8MH63 180 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 CTDSP1Q9GZU7 261 aa11.54□□□□□ -0.56
POLR2J-202ENST00000393794 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
POLR2J-202ENST00000393794 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
POLR2J-202ENST00000393794 FSIP2Q5CZC0 6907 aa11.52□□□□□ -0.56
POLR2J-202ENST00000393794 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
POLR2J-202ENST00000393794 KRTAP13-2Q52LG2 175 aa11.52□□□□□ -0.57
POLR2J-202ENST00000393794 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
POLR2J-202ENST00000393794 LINC01561Q8N1V8 128 aa11.52□□□□□ -0.57
POLR2J-202ENST00000393794 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
POLR2J-202ENST00000393794 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
POLR2J-202ENST00000393794 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
POLR2J-202ENST00000393794 PACRGQ96M98 296 aaPredicted RBP11.49□□□□□ -0.57
POLR2J-202ENST00000393794 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
POLR2J-202ENST00000393794 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
POLR2J-202ENST00000393794 BCE1O60756 84 aa11.48□□□□□ -0.57
POLR2J-202ENST00000393794 RPL28P46779 137 aaKnown RBP11.48□□□□□ -0.57
POLR2J-202ENST00000393794 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
POLR2J-202ENST00000393794 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
POLR2J-202ENST00000393794 S100A1P23297 94 aa11.47□□□□□ -0.57
POLR2J-202ENST00000393794 CKS2P33552 79 aa11.47□□□□□ -0.57
POLR2J-202ENST00000393794 SVBPQ8N300 66 aa11.47□□□□□ -0.57
POLR2J-202ENST00000393794 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
POLR2J-202ENST00000393794 IGLV4-3A0A075B6K6 122 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 MT-ND4LP03901 98 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 CTAG1AP78358 180 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 ADIRFQ15847 76 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 CDIP1Q9H305 208 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 ANAPC11Q9NYG5 84 aa11.46□□□□□ -0.57
POLR2J-202ENST00000393794 SNAPINO95295 136 aa11.45□□□□□ -0.58
POLR2J-202ENST00000393794 ADCYAP1P18509 176 aa11.45□□□□□ -0.58
POLR2J-202ENST00000393794 ANAPC16Q96DE5 110 aa11.45□□□□□ -0.58
POLR2J-202ENST00000393794 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
POLR2J-202ENST00000393794 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
POLR2J-202ENST00000393794 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms