RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 NSD3Q9BZ95 1437 aa-2.48□□□□□ -2.81
SNORA40.4-201ENST00000390971 TULP4Q9NRJ4 1543 aa-2.48□□□□□ -2.81
SNORA40.4-201ENST00000390971 FASNP49327 2511 aaKnown RBP-2.49□□□□□ -2.81
SNORA40.4-201ENST00000390971 TRBV7-3A0A075B6L6 115 aa-2.49□□□□□ -2.81
SNORA40.4-201ENST00000390971 DR1Q01658 176 aa-2.49□□□□□ -2.81
SNORA40.4-201ENST00000390971 TRBV7-4A0A0J9YYF1 115 aa-2.5□□□□□ -2.81
SNORA40.4-201ENST00000390971 LSM10Q969L4 123 aaKnown RBP-2.5□□□□□ -2.81
SNORA40.4-201ENST00000390971 HMGN4O00479 90 aa-2.51□□□□□ -2.81
SNORA40.4-201ENST00000390971 RYR2Q92736 4967 aa-2.52□□□□□ -2.81
SNORA40.4-201ENST00000390971 LOC285095A0A1B0GVY8 99 aa-2.52□□□□□ -2.81
SNORA40.4-201ENST00000390971 SFT2D2O95562 160 aa-2.52□□□□□ -2.81
SNORA40.4-201ENST00000390971 SERP1Q9Y6X1 66 aa-2.52□□□□□ -2.81
SNORA40.4-201ENST00000390971 DNAH6Q9C0G6 4158 aa-2.53□□□□□ -2.81
SNORA40.4-201ENST00000390971 RERGLQ9H628 205 aa-2.54□□□□□ -2.82
SNORA40.4-201ENST00000390971 MGPP08493 103 aa-2.55□□□□□ -2.82
SNORA40.4-201ENST00000390971 TMEM263Q8WUH6 116 aaKnown RBP-2.55□□□□□ -2.82
SNORA40.4-201ENST00000390971 TSLPQ969D9 159 aa-2.55□□□□□ -2.82
SNORA40.4-201ENST00000390971 KIAA0556O60303 1618 aa-2.56□□□□□ -2.82
SNORA40.4-201ENST00000390971 SYS1-DBNDD2H3BUS1 97 aa-2.56□□□□□ -2.82
SNORA40.4-201ENST00000390971 SPRR2EP22531 72 aa-2.56□□□□□ -2.82
SNORA40.4-201ENST00000390971 ARPC4P59998 168 aa-2.57□□□□□ -2.82
SNORA40.4-201ENST00000390971 PFDN5Q99471 154 aa-2.57□□□□□ -2.82
SNORA40.4-201ENST00000390971 TACC2O95359 2948 aa-2.58□□□□□ -2.82
SNORA40.4-201ENST00000390971 MYO18BQ8IUG5 2567 aa-2.58□□□□□ -2.82
SNORA40.4-201ENST00000390971 COX8AP10176 69 aa-2.58□□□□□ -2.82
SNORA40.4-201ENST00000390971 SNRNP25Q9BV90 132 aaKnown RBP-2.59□□□□□ -2.82
SNORA40.4-201ENST00000390971 TNRC18O15417 2968 aaPredicted RBP-2.59□□□□□ -2.82
SNORA40.4-201ENST00000390971 MUC17Q685J3 4493 aa-2.6□□□□□ -2.82
SNORA40.4-201ENST00000390971 MYOM1P52179 1685 aa-2.6□□□□□ -2.82
SNORA40.4-201ENST00000390971 LINC00959A0A1B0GUT2 108 aa-2.6□□□□□ -2.83
SNORA40.4-201ENST00000390971 C10orf113Q5VZT2 155 aa-2.6□□□□□ -2.83
SNORA40.4-201ENST00000390971 MRPL54Q6P161 138 aaKnown RBP-2.61□□□□□ -2.83
SNORA40.4-201ENST00000390971 PPP3R2Q96LZ3 170 aa-2.61□□□□□ -2.83
SNORA40.4-201ENST00000390971 MAGI1Q96QZ7 1491 aaPredicted RBP-2.61□□□□□ -2.83
SNORA40.4-201ENST00000390971 CPSF1Q10570 1443 aaKnown RBP-2.61□□□□□ -2.83
SNORA40.4-201ENST00000390971 SETBP1Q9Y6X0 1596 aa-2.61□□□□□ -2.83
SNORA40.4-201ENST00000390971 USMG5Q96IX5 58 aa-2.62□□□□□ -2.83
SNORA40.4-201ENST00000390971 NAA60Q9H7X0 242 aa-2.62□□□□□ -2.83
SNORA40.4-201ENST00000390971 FAIMQ9NVQ4 179 aa-2.62□□□□□ -2.83
SNORA40.4-201ENST00000390971 DEFB135Q30KP9 77 aa-2.63□□□□□ -2.83
SNORA40.4-201ENST00000390971 SPRR4Q96PI1 79 aa-2.64□□□□□ -2.83
SNORA40.4-201ENST00000390971 SPANXDQ9BXN6 97 aa-2.64□□□□□ -2.83
SNORA40.4-201ENST00000390971 TEP1Q99973 2627 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.4-201ENST00000390971 PAIP2BQ9ULR5 123 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.4-201ENST00000390971 BTAF1O14981 1849 aa-2.65□□□□□ -2.83
SNORA40.4-201ENST00000390971 IFNGP01579 166 aa-2.66□□□□□ -2.84
SNORA40.4-201ENST00000390971 NXT2Q9NPJ8 142 aaKnown RBP-2.66□□□□□ -2.84
SNORA40.4-201ENST00000390971 UBA52P62987 128 aaKnown RBP-2.67□□□□□ -2.84
SNORA40.4-201ENST00000390971 NIPBLQ6KC79 2804 aaeCLIP-2.67□□□□□ -2.84
SNORA40.4-201ENST00000390971 DNAH3Q8TD57 4116 aa-2.67□□□□□ -2.84
SNORA40.4-201ENST00000390971 PSME4Q14997 1843 aa-2.68□□□□□ -2.84
SNORA40.4-201ENST00000390971 ZFHX3Q15911 3703 aa-2.68□□□□□ -2.84
SNORA40.4-201ENST00000390971 IGLC1P0CG04 106 aa-2.68□□□□□ -2.84
SNORA40.4-201ENST00000390971 WHAMMP3Q1A5X7 153 aa-2.68□□□□□ -2.84
SNORA40.4-201ENST00000390971 HMGXB3Q12766 1538 aa-2.68□□□□□ -2.84
SNORA40.4-201ENST00000390971 MIF4GDA9UHW6 222 aaKnown RBP-2.69□□□□□ -2.84
SNORA40.4-201ENST00000390971 ARHGEF5Q12774 1597 aa-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 PRRC2CQ9Y520 2896 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 SSSCA1O60232 199 aa-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 FDCSPQ8NFU4 85 aa-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 LINC01600Q96MT4 127 aa-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 APLNQ9ULZ1 77 aa-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.7□□□□□ -2.84
SNORA40.4-201ENST00000390971 CHKB-CPT1BH3BT56 60 aa-2.71□□□□□ -2.84
SNORA40.4-201ENST00000390971 MEIG1Q5JSS6 88 aa-2.71□□□□□ -2.84
SNORA40.4-201ENST00000390971 COMMD6Q7Z4G1 85 aa-2.71□□□□□ -2.84
SNORA40.4-201ENST00000390971 SMG6Q86US8 1419 aaKnown RBP-2.71□□□□□ -2.84
SNORA40.4-201ENST00000390971 Q56UQ5 140 aa-2.72□□□□□ -2.84
SNORA40.4-201ENST00000390971 UQCR10Q9UDW1 63 aa-2.72□□□□□ -2.84
SNORA40.4-201ENST00000390971 PKHD1L1Q86WI1 4243 aa-2.72□□□□□ -2.85
SNORA40.4-201ENST00000390971 FAM25AB3EWG3 89 aa-2.73□□□□□ -2.85
SNORA40.4-201ENST00000390971 FAM25CB3EWG5 89 aa-2.73□□□□□ -2.85
SNORA40.4-201ENST00000390971 FAM25GB3EWG6 89 aa-2.73□□□□□ -2.85
SNORA40.4-201ENST00000390971 C8orf59Q8N0T1 100 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.4-201ENST00000390971 MYOZ3Q8TDC0 251 aa-2.73□□□□□ -2.85
SNORA40.4-201ENST00000390971 RNF213Q63HN8 5207 aa-2.74□□□□□ -2.85
SNORA40.4-201ENST00000390971 HTTP42858 3142 aa-2.74□□□□□ -2.85
SNORA40.4-201ENST00000390971 SHROOM2Q13796 1616 aa-2.74□□□□□ -2.85
SNORA40.4-201ENST00000390971 FAM223AQ8IWN6 122 aa-2.74□□□□□ -2.85
SNORA40.4-201ENST00000390971 ARL11Q969Q4 196 aa-2.74□□□□□ -2.85
SNORA40.4-201ENST00000390971 C5orf38Q86SI9 138 aa-2.75□□□□□ -2.85
SNORA40.4-201ENST00000390971 FAM167A-AS1Q96KT0 104 aa-2.75□□□□□ -2.85
SNORA40.4-201ENST00000390971 CDC42SE2Q9NRR3 84 aa-2.75□□□□□ -2.85
SNORA40.4-201ENST00000390971 CPSF4LA6NMK7 179 aaKnown RBP-2.76□□□□□ -2.85
SNORA40.4-201ENST00000390971 CATR1Q13166 79 aa-2.76□□□□□ -2.85
SNORA40.4-201ENST00000390971 DSPP15924 2871 aaKnown RBP-2.76□□□□□ -2.85
SNORA40.4-201ENST00000390971 SPTBN4Q9H254 2564 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 SELENOWP63302 87 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 BTG2P78543 158 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 PRO1933Q9H354 126 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 TET3O43151 1660 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 VPS13DQ5THJ4 4388 aa-2.77□□□□□ -2.85
SNORA40.4-201ENST00000390971 FMN2Q9NZ56 1722 aa-2.78□□□□□ -2.85
SNORA40.4-201ENST00000390971 APOC2P02655 101 aa-2.78□□□□□ -2.85
SNORA40.4-201ENST00000390971 LINC00470Q9BZP3 86 aa-2.78□□□□□ -2.85
SNORA40.4-201ENST00000390971 ARL2-SNX15V9GYD0 113 aa-2.78□□□□□ -2.85
SNORA40.4-201ENST00000390971 LINC00474Q9P2X8 69 aa-2.79□□□□□ -2.86
SNORA40.4-201ENST00000390971 USP9XQ93008 2570 aaPredicted RBP-2.8□□□□□ -2.86
SNORA40.4-201ENST00000390971 C1orf167Q5SNV9 1468 aa-2.81□□□□□ -2.86
SNORA40.4-201ENST00000390971 LAMA1P25391 3075 aa-2.81□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms