RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
CSPG5-202ENST00000383738 PRO0461Q9UI25 63 aa13.86□□□□□ -0.19
CSPG5-202ENST00000383738 LECT2O14960 151 aa13.86□□□□□ -0.19
CSPG5-202ENST00000383738 CNFNQ9BYD5 112 aa13.86□□□□□ -0.19
CSPG5-202ENST00000383738 TMEM223A0PJW6 202 aa13.85□□□□□ -0.19
CSPG5-202ENST00000383738 UBE2D3P61077 147 aa13.85□□□□□ -0.19
CSPG5-202ENST00000383738 UBE2D2P62837 147 aa13.85□□□□□ -0.19
CSPG5-202ENST00000383738 A0A0B4J2C4 111 aa13.84□□□□□ -0.19
CSPG5-202ENST00000383738 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
CSPG5-202ENST00000383738 SLPIP03973 132 aa13.84□□□□□ -0.19
CSPG5-202ENST00000383738 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
CSPG5-202ENST00000383738 H7C423 109 aa13.84□□□□□ -0.19
CSPG5-202ENST00000383738 HERVK_113P63121 156 aa13.83□□□□□ -0.19
CSPG5-202ENST00000383738 PSCAO43653 123 aa13.83□□□□□ -0.2
CSPG5-202ENST00000383738 NBEAL2Q6ZNJ1 2754 aa13.82□□□□□ -0.2
CSPG5-202ENST00000383738 MIAQ16674 131 aa13.82□□□□□ -0.2
CSPG5-202ENST00000383738 IGLV4-69A0A075B6H9 119 aa13.82□□□□□ -0.2
CSPG5-202ENST00000383738 M0QXV9 152 aa13.82□□□□□ -0.2
CSPG5-202ENST00000383738 ASH1LQ9NR48 2969 aaKnown RBP13.81□□□□□ -0.2
CSPG5-202ENST00000383738 LINC00694P0DN24 101 aa13.81□□□□□ -0.2
CSPG5-202ENST00000383738 TMEM263Q8WUH6 116 aaKnown RBP13.81□□□□□ -0.2
CSPG5-202ENST00000383738 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
CSPG5-202ENST00000383738 SS18Q15532 418 aa13.81□□□□□ -0.2
CSPG5-202ENST00000383738 FAM222AQ5U5X8 452 aa13.81□□□□□ -0.2
CSPG5-202ENST00000383738 VSIG2Q96IQ7 327 aa13.81□□□□□ -0.2
CSPG5-202ENST00000383738 M0QY20 66 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 MIR7-3HGQ8N6C7 128 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 SPANXA1Q9NS26 97 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 IGIPA6NJ69 53 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 SPART-AS1P0CW21 52 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 POM121L12Q8N7R1 296 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 TRAV23DV6A0A075B6W5 121 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 FHL3Q13643 280 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 LINC00467Q9BRT7 94 aa13.8□□□□□ -0.2
CSPG5-202ENST00000383738 POLR2KP53803 58 aaKnown RBP13.79□□□□□ -0.2
CSPG5-202ENST00000383738 C16orf74Q96GX8 76 aa13.79□□□□□ -0.2
CSPG5-202ENST00000383738 J3KT08 172 aa13.79□□□□□ -0.2
CSPG5-202ENST00000383738 COL27A1Q8IZC6 1860 aaPredicted RBP13.78□□□□□ -0.2
CSPG5-202ENST00000383738 CRYGDP07320 174 aa13.78□□□□□ -0.2
CSPG5-202ENST00000383738 ADAMTSL4-AS1Q5T5F5 129 aa13.78□□□□□ -0.2
CSPG5-202ENST00000383738 C1orf43Q9BWL3 253 aa13.78□□□□□ -0.2
CSPG5-202ENST00000383738 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
CSPG5-202ENST00000383738 LINC00643Q86TS7 51 aa13.77□□□□□ -0.2
CSPG5-202ENST00000383738 NDUFA7O95182 113 aa13.77□□□□□ -0.21
CSPG5-202ENST00000383738 TRAV13-2A0A0B4J235 113 aa13.77□□□□□ -0.21
CSPG5-202ENST00000383738 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 K7EQD1 137 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 UBL5Q9BZL1 73 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 PPDPFQ9H3Y8 114 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 IGHV4-4A0A075B6R2 117 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 ACYP1P07311 99 aa13.76□□□□□ -0.21
CSPG5-202ENST00000383738 TSHBP01222 138 aa13.75□□□□□ -0.21
CSPG5-202ENST00000383738 TRBV27A0A0K0K1C4 114 aa13.75□□□□□ -0.21
CSPG5-202ENST00000383738 IGKV2D-24A0A075B6R9 120 aa13.74□□□□□ -0.21
CSPG5-202ENST00000383738 ATOX1O00244 68 aa13.74□□□□□ -0.21
CSPG5-202ENST00000383738 RBM3P98179 157 aaKnown RBP13.73□□□□□ -0.21
CSPG5-202ENST00000383738 RBMY1FQ15415 496 aaKnown RBP13.73□□□□□ -0.21
CSPG5-202ENST00000383738 NCR3O14931 201 aa13.73□□□□□ -0.21
CSPG5-202ENST00000383738 LINC00308Q8TCZ7 52 aa13.73□□□□□ -0.21
CSPG5-202ENST00000383738 A0A087WVE0 104 aa13.73□□□□□ -0.21
CSPG5-202ENST00000383738 C20orf197Q8N268 126 aa13.73□□□□□ -0.21
CSPG5-202ENST00000383738 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 SVIPQ8NHG7 77 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 DNAJC30Q96LL9 226 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 LOC100131303A0A0U1RQF7 123 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 COX7A2LO14548 114 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 UQCRQO14949 82 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 ZFHX4Q86UP3 3567 aa13.72□□□□□ -0.21
CSPG5-202ENST00000383738 C3orf22Q8N5N4 141 aa13.71□□□□□ -0.21
CSPG5-202ENST00000383738 KLK12Q9UKR0 248 aa13.71□□□□□ -0.21
CSPG5-202ENST00000383738 LST1O00453 97 aa13.71□□□□□ -0.21
CSPG5-202ENST00000383738 RNF152Q8N8N0 203 aa13.71□□□□□ -0.21
CSPG5-202ENST00000383738 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.22
CSPG5-202ENST00000383738 MED14OSP0DP75 135 aa13.7□□□□□ -0.22
CSPG5-202ENST00000383738 DSCR8Q96T75 97 aa13.7□□□□□ -0.22
CSPG5-202ENST00000383738 TIRAPP58753 221 aa13.69□□□□□ -0.22
CSPG5-202ENST00000383738 ORMDL1Q9P0S3 153 aa13.68□□□□□ -0.22
CSPG5-202ENST00000383738 NSD1Q96L73 2696 aaPredicted RBP13.68□□□□□ -0.22
CSPG5-202ENST00000383738 NF1P21359 2839 aa13.68□□□□□ -0.22
CSPG5-202ENST00000383738 CELSR2Q9HCU4 2923 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 COX7B2Q8TF08 81 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 ODF3Q96PU9 254 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 KLLNB2CW77 178 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 GHRHP01286 108 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 RETNQ9HD89 108 aa13.67□□□□□ -0.22
CSPG5-202ENST00000383738 DCHS2Q6V1P9 2916 aa13.66□□□□□ -0.22
CSPG5-202ENST00000383738 PRO0255Q9UI72 69 aa13.65□□□□□ -0.22
CSPG5-202ENST00000383738 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
CSPG5-202ENST00000383738 Q9UF83 564 aa13.63□□□□□ -0.23
CSPG5-202ENST00000383738 IGHV4-30-4P0DP06 118 aa13.61□□□□□ -0.23
CSPG5-202ENST00000383738 COX8CQ7Z4L0 72 aa13.61□□□□□ -0.23
CSPG5-202ENST00000383738 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
CSPG5-202ENST00000383738 HRCT1Q6UXD1 115 aa13.61□□□□□ -0.23
CSPG5-202ENST00000383738 C11orf45Q8TAV5 145 aa13.6□□□□□ -0.23
CSPG5-202ENST00000383738 PKIGQ9Y2B9 76 aa13.6□□□□□ -0.23
CSPG5-202ENST00000383738 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
CSPG5-202ENST00000383738 BRI3O95415 125 aa13.6□□□□□ -0.23
CSPG5-202ENST00000383738 IGLV1-51P01701 117 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms