RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 COX8AP10176 69 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 ZFAND6Q6FIF0 208 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 IGLV10-54A0A075B6I4 117 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 CCL25O15444 150 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 XCL1P47992 114 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 UQCR10Q9UDW1 63 aa18.19■□□□□ 0.5
MSX1-201ENST00000382723 CSMD3Q7Z407 3707 aa18.18■□□□□ 0.5
MSX1-201ENST00000382723 H3BRM9 83 aa18.18■□□□□ 0.5
MSX1-201ENST00000382723 LINC01556Q5JQF7 62 aa18.18■□□□□ 0.5
MSX1-201ENST00000382723 DNAH7Q8WXX0 4024 aa18.18■□□□□ 0.5
MSX1-201ENST00000382723 TRAV8-3A0A0A6YYJ7 113 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 LBHQ53QV2 105 aaPredicted RBP18.17■□□□□ 0.5
MSX1-201ENST00000382723 SLC25A34Q6PIV7 304 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 SIVA1O15304 175 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 ENHOQ6UWT2 76 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 UBE2WQ96B02 151 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 PRR34Q9NV39 138 aa18.17■□□□□ 0.5
MSX1-201ENST00000382723 DYNC2H1Q8NCM8 4307 aaKnown RBP18.16■□□□□ 0.5
MSX1-201ENST00000382723 CRPP02741 224 aa18.15■□□□□ 0.5
MSX1-201ENST00000382723 DNAH10OSP0CZ25 163 aa18.15■□□□□ 0.5
MSX1-201ENST00000382723 M0R143 59 aa18.15■□□□□ 0.5
MSX1-201ENST00000382723 CHCHD10Q8WYQ3 142 aaPredicted RBP18.14■□□□□ 0.49
MSX1-201ENST00000382723 TSPEAR-AS2P59090 65 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 UBE2DNLQ8IWF7 75 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 UPK3BQ9BT76 320 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 IGHV3OR16-9A0A0B4J2B5 98 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 C5orf38Q86SI9 138 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 MAPKAPK5-AS1Q8N8E1 139 aa18.13■□□□□ 0.49
MSX1-201ENST00000382723 LEPROTO15243 131 aa18.12■□□□□ 0.49
MSX1-201ENST00000382723 BOD1L2Q8IYS8 172 aa18.12■□□□□ 0.49
MSX1-201ENST00000382723 IGHV1-58A0A0C4DH39 117 aa18.11■□□□□ 0.49
MSX1-201ENST00000382723 J3QQQ9 107 aa18.11■□□□□ 0.49
MSX1-201ENST00000382723 A0A1B0GV90 55 aa18.1■□□□□ 0.49
MSX1-201ENST00000382723 SMIM1B2RUZ4 78 aa18.1■□□□□ 0.49
MSX1-201ENST00000382723 Q9H8V8 135 aa18.1■□□□□ 0.49
MSX1-201ENST00000382723 LGALS3P17931 250 aaKnown RBP18.09■□□□□ 0.49
MSX1-201ENST00000382723 CD164L2Q6UWJ8 174 aa18.09■□□□□ 0.49
MSX1-201ENST00000382723 PLEKHB2Q96CS7 222 aa18.09■□□□□ 0.49
MSX1-201ENST00000382723 HNRNPA3P51991 378 aaKnown RBP18.08■□□□□ 0.49
MSX1-201ENST00000382723 MUC7Q8TAX7 377 aa18.08■□□□□ 0.49
MSX1-201ENST00000382723 A0A087WZ39 114 aa18.07■□□□□ 0.48
MSX1-201ENST00000382723 GAGE12HA6NDE8 117 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 ZNF815PA8K554 130 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 DLEU1O43261 78 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 MIAQ16674 131 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 TGP01266 2768 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 MYMXA0A1B0GTQ4 84 aa18.06■□□□□ 0.48
MSX1-201ENST00000382723 IGLV5-39A0A0G2JS06 123 aa18.05■□□□□ 0.48
MSX1-201ENST00000382723 LYSTQ99698 3801 aa18.05■□□□□ 0.48
MSX1-201ENST00000382723 STARD9Q9P2P6 4700 aa18.04■□□□□ 0.48
MSX1-201ENST00000382723 TRAV8-4A0A0B4J246 113 aa18.04■□□□□ 0.48
MSX1-201ENST00000382723 FOXI1Q12951 378 aa18.04■□□□□ 0.48
MSX1-201ENST00000382723 WWC2-AS2Q96NR7 200 aa18.04■□□□□ 0.48
MSX1-201ENST00000382723 COX7A2LO14548 114 aa18.03■□□□□ 0.48
MSX1-201ENST00000382723 Q9HAA7 133 aa18.03■□□□□ 0.48
MSX1-201ENST00000382723 C2orf91Q6ZV80 131 aa18.02■□□□□ 0.48
MSX1-201ENST00000382723 PLECQ15149 4684 aaKnown RBP18.01■□□□□ 0.47
MSX1-201ENST00000382723 TOMM7Q9P0U1 55 aa18.01■□□□□ 0.47
MSX1-201ENST00000382723 MALP21145 153 aa18■□□□□ 0.47
MSX1-201ENST00000382723 IBA57-AS1B1ANH7 110 aa18■□□□□ 0.47
MSX1-201ENST00000382723 BATFQ16520 125 aa17.99■□□□□ 0.47
MSX1-201ENST00000382723 NDUFA12Q9UI09 145 aa17.99■□□□□ 0.47
MSX1-201ENST00000382723 IGKV2D-24A0A075B6R9 120 aa17.98■□□□□ 0.47
MSX1-201ENST00000382723 SCGB1D4Q6XE38 83 aa17.98■□□□□ 0.47
MSX1-201ENST00000382723 C10orf126Q8N4M7 172 aa17.98■□□□□ 0.47
MSX1-201ENST00000382723 C1orf43Q9BWL3 253 aa17.98■□□□□ 0.47
MSX1-201ENST00000382723 TENM2Q9NT68 2774 aa17.98■□□□□ 0.47
MSX1-201ENST00000382723 COX7B2Q8TF08 81 aa17.97■□□□□ 0.47
MSX1-201ENST00000382723 KRTAP26-1Q6PEX3 210 aa17.95■□□□□ 0.46
MSX1-201ENST00000382723 LINC01561Q8N1V8 128 aa17.95■□□□□ 0.46
MSX1-201ENST00000382723 ORAOV1Q8WV07 137 aa17.93■□□□□ 0.46
MSX1-201ENST00000382723 KRTAP1-5Q9BYS1 174 aa17.93■□□□□ 0.46
MSX1-201ENST00000382723 NDUFA1O15239 70 aa17.91■□□□□ 0.46
MSX1-201ENST00000382723 HIGD1BQ9P298 99 aa17.91■□□□□ 0.46
MSX1-201ENST00000382723 K7EP13 123 aa17.9■□□□□ 0.46
MSX1-201ENST00000382723 PRSS2P07478 247 aa17.9■□□□□ 0.46
MSX1-201ENST00000382723 HINT1P49773 126 aaPredicted RBP17.9■□□□□ 0.46
MSX1-201ENST00000382723 C6orf226Q5I0X4 101 aa17.9■□□□□ 0.46
MSX1-201ENST00000382723 ZNF625Q96I27 306 aaPredicted RBP17.9■□□□□ 0.46
MSX1-201ENST00000382723 A0A0J9YXY3 114 aa17.89■□□□□ 0.45
MSX1-201ENST00000382723 APOMO95445 188 aa17.89■□□□□ 0.45
MSX1-201ENST00000382723 COL5A1-AS1Q5SY13 56 aa17.89■□□□□ 0.45
MSX1-201ENST00000382723 CASC10Q5T4H9 136 aa17.88■□□□□ 0.45
MSX1-201ENST00000382723 Q8IZM0 81 aa17.88■□□□□ 0.45
MSX1-201ENST00000382723 RMI2Q96E14 147 aa17.86■□□□□ 0.45
MSX1-201ENST00000382723 DNAH1Q9P2D7 4330 aa17.85■□□□□ 0.45
MSX1-201ENST00000382723 CFAP161Q6P656 301 aa17.85■□□□□ 0.45
MSX1-201ENST00000382723 KIAA0087Q14695 138 aa17.84■□□□□ 0.45
MSX1-201ENST00000382723 SPAG11BQ08648 103 aa17.84■□□□□ 0.45
MSX1-201ENST00000382723 HIST1H4GQ99525 98 aa17.84■□□□□ 0.45
MSX1-201ENST00000382723 NBDYA0A0U1RRE5 68 aa17.83■□□□□ 0.44
MSX1-201ENST00000382723 C2orf82Q6UX34 121 aa17.83■□□□□ 0.44
MSX1-201ENST00000382723 LINC00526Q96FQ7 95 aa17.83■□□□□ 0.44
MSX1-201ENST00000382723 HSD52Q0P140 79 aa17.82■□□□□ 0.44
MSX1-201ENST00000382723 CKS1BP61024 79 aa17.82■□□□□ 0.44
MSX1-201ENST00000382723 HERV-K104P63124 156 aa17.81■□□□□ 0.44
MSX1-201ENST00000382723 SRSF9Q13242 221 aaKnown RBP eCLIP17.81■□□□□ 0.44
MSX1-201ENST00000382723 TTC32Q5I0X7 151 aa17.81■□□□□ 0.44
MSX1-201ENST00000382723 C6orf223Q8N319 242 aa17.81■□□□□ 0.44
MSX1-201ENST00000382723 C3orf84H3BNL1 204 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms