RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TRBV7-7A0A0K0K1E9 115 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 NUP210Q8TEM1 1887 aaPredicted RBP4.33□□□□□ -1.72
RFX3-204ENST00000382004 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 SHISA2Q6UWI4 295 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 DOPEY1Q5JWR5 2465 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 C1orf137Q5JT78 98 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 Q6JHZ5 121 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 SBSPONQ8IVN8 264 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 MBD6Q96DN6 1003 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 H0Y9P7 68 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 TSHBP01222 138 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 GPR179Q6PRD1 2367 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 CRIP1P50238 77 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 PRLHP81277 87 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 COX17Q14061 63 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 C10orf99Q6UWK7 81 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 Q6ZSR3 168 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 PCNX3Q9H6A9 2034 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
RFX3-204ENST00000382004 XGP55808 180 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 Q6ZS46 218 aa4.32□□□□□ -1.72
RFX3-204ENST00000382004 IGLV2-11P01706 119 aa4.31□□□□□ -1.72
RFX3-204ENST00000382004 CYSRT1A8MQ03 144 aa4.31□□□□□ -1.72
RFX3-204ENST00000382004 NAV3Q8IVL0 2385 aa4.31□□□□□ -1.72
RFX3-204ENST00000382004 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
RFX3-204ENST00000382004 C9orf116Q5BN46 136 aaPredicted RBP4.31□□□□□ -1.72
RFX3-204ENST00000382004 LINC01556Q5JQF7 62 aa4.31□□□□□ -1.72
RFX3-204ENST00000382004 NUP210LQ5VU65 1888 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 A0A087WVE0 104 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 ODF3BA8MYP8 253 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 Q6ZSV7 163 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 LMO4P61968 165 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 C6orf223Q8N319 242 aa4.3□□□□□ -1.72
RFX3-204ENST00000382004 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
RFX3-204ENST00000382004 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 C18orf65Q6ZTR6 163 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 Q9BRP9 147 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 U3KQK5 164 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 C7orf65Q6ZTY9 151 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 THSD7BQ9C0I4 1608 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 Q9UF83 564 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 LY6G6DO95868 133 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 RNASE3P12724 160 aaKnown RBP4.29□□□□□ -1.72
RFX3-204ENST00000382004 SPAG11AQ6PDA7 123 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 Q8N814 137 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 C19orf84I3L1E1 186 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 FSHBP01225 129 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 Q8IZM0 81 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 NRACQ8N912 160 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 HCG22E2RYF7 251 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 LINC00575Q6W349 94 aa4.29□□□□□ -1.72
RFX3-204ENST00000382004 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 LTBP1Q14766 1721 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 Q8N3U1 123 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 A0A087WYN8 130 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 WISP2O76076 250 aa4.28□□□□□ -1.72
RFX3-204ENST00000382004 KIAA1549LQ6ZVL6 1849 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 A0A087WSZ3 146 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 ABCA2Q9BZC7 2435 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 OXLD1Q5BKU9 147 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 C11orf1Q9H5F2 150 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 C2orf48Q96LS8 159 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
RFX3-204ENST00000382004 PRR9Q5T870 116 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 TANC1Q9C0D5 1861 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 ALPK3Q96L96 1907 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 A0A1B0GU69 56 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 RAI1Q7Z5J4 1906 aaPredicted RBP4.26□□□□□ -1.73
RFX3-204ENST00000382004 C1orf229Q6ZS94 237 aaPredicted RBP4.26□□□□□ -1.73
RFX3-204ENST00000382004 Q8NA96 180 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 COX6A2Q02221 97 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 FBXL19-AS1Q494R0 122 aa4.26□□□□□ -1.73
RFX3-204ENST00000382004 GAS8-AS1O95177 125 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 ZNF702PQ9H963 129 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 CEP192Q8TEP8 1941 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 P0C879 139 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 EGFEM1PQ0D2K5 195 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 VPREB1P12018 145 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 LINC01006Q8NI28 216 aa4.25□□□□□ -1.73
RFX3-204ENST00000382004 BRI3O95415 125 aa4.24□□□□□ -1.73
RFX3-204ENST00000382004 IGLV8-61A0A075B6I0 122 aa4.24□□□□□ -1.73
RFX3-204ENST00000382004 BRWD1-AS2P59051 145 aa4.24□□□□□ -1.73
RFX3-204ENST00000382004 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
RFX3-204ENST00000382004 PSMG3-AS1Q96PY0 264 aa4.24□□□□□ -1.73
RFX3-204ENST00000382004 C11orf21Q9P2W6 132 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms