RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
SNRPB-201ENST00000381342 A0A096LNJ9 63 aa10.55□□□□□ -0.72
SNRPB-201ENST00000381342 SERF1AO75920 110 aa10.55□□□□□ -0.72
SNRPB-201ENST00000381342 LINC00310P59036 64 aa10.55□□□□□ -0.72
SNRPB-201ENST00000381342 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
SNRPB-201ENST00000381342 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
SNRPB-201ENST00000381342 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 NPSP0C0P6 89 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 ERASQ7Z444 233 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 AMELXQ99217 191 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
SNRPB-201ENST00000381342 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
SNRPB-201ENST00000381342 LINC01620Q4KN68 170 aa10.53□□□□□ -0.72
SNRPB-201ENST00000381342 VCX2Q9H322 139 aa10.53□□□□□ -0.72
SNRPB-201ENST00000381342 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 COX7A2LO14548 114 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 HBDP02042 147 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 UBE2D1P51668 147 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
SNRPB-201ENST00000381342 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
SNRPB-201ENST00000381342 RYR1P21817 5038 aa10.51□□□□□ -0.73
SNRPB-201ENST00000381342 SNRPEP62304 92 aaKnown RBP10.51□□□□□ -0.73
SNRPB-201ENST00000381342 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
SNRPB-201ENST00000381342 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
SNRPB-201ENST00000381342 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
SNRPB-201ENST00000381342 GVQW2A0A096LPI5 108 aaPredicted RBP10.5□□□□□ -0.73
SNRPB-201ENST00000381342 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
SNRPB-201ENST00000381342 NUPR1O60356 82 aa10.5□□□□□ -0.73
SNRPB-201ENST00000381342 HSBP1O75506 76 aa10.5□□□□□ -0.73
SNRPB-201ENST00000381342 MALP21145 153 aa10.5□□□□□ -0.73
SNRPB-201ENST00000381342 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
SNRPB-201ENST00000381342 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
SNRPB-201ENST00000381342 XGP55808 180 aa10.49□□□□□ -0.73
SNRPB-201ENST00000381342 COX6A2Q02221 97 aa10.49□□□□□ -0.73
SNRPB-201ENST00000381342 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
SNRPB-201ENST00000381342 HSPG2P98160 4391 aa10.49□□□□□ -0.73
SNRPB-201ENST00000381342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.48□□□□□ -0.73
SNRPB-201ENST00000381342 CNBPP62633 177 aaKnown RBP10.48□□□□□ -0.73
SNRPB-201ENST00000381342 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
SNRPB-201ENST00000381342 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
SNRPB-201ENST00000381342 SLPIP03973 132 aa10.47□□□□□ -0.73
SNRPB-201ENST00000381342 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
SNRPB-201ENST00000381342 S100A2P29034 98 aa10.46□□□□□ -0.73
SNRPB-201ENST00000381342 DNAH8Q96JB1 4490 aa10.46□□□□□ -0.74
SNRPB-201ENST00000381342 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
SNRPB-201ENST00000381342 PMVKQ15126 192 aa10.45□□□□□ -0.74
SNRPB-201ENST00000381342 FAM19A3Q7Z5A8 133 aa10.45□□□□□ -0.74
SNRPB-201ENST00000381342 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
SNRPB-201ENST00000381342 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
SNRPB-201ENST00000381342 A0A087WZ39 114 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 ZNF561-AS1K7EIQ3 104 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 APOMO95445 188 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
SNRPB-201ENST00000381342 HAMPP81172 84 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 SPAG11BQ08648 103 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 HIST1H2BLQ99880 126 aa10.44□□□□□ -0.74
SNRPB-201ENST00000381342 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 IGHV3-64A0A075B6Q5 118 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
SNRPB-201ENST00000381342 ATP5LO75964 103 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 HERVK_113P63121 156 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 Q5VSD8 79 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
SNRPB-201ENST00000381342 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
SNRPB-201ENST00000381342 SEC11AP67812 179 aa10.42□□□□□ -0.74
SNRPB-201ENST00000381342 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
SNRPB-201ENST00000381342 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 FABP4P15090 132 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 Q6ZSA8 131 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 LINC00469Q8N7U9 141 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
SNRPB-201ENST00000381342 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
SNRPB-201ENST00000381342 SYCNQ0VAF6 134 aa10.4□□□□□ -0.74
SNRPB-201ENST00000381342 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.74
SNRPB-201ENST00000381342 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
SNRPB-201ENST00000381342 Q6ZRU5 148 aa10.39□□□□□ -0.75
SNRPB-201ENST00000381342 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
SNRPB-201ENST00000381342 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
SNRPB-201ENST00000381342 CHAC1Q9BUX1 264 aa10.39□□□□□ -0.75
SNRPB-201ENST00000381342 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
SNRPB-201ENST00000381342 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
SNRPB-201ENST00000381342 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
SNRPB-201ENST00000381342 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
SNRPB-201ENST00000381342 IGLV5-45A0A087WSX0 123 aa10.37□□□□□ -0.75
SNRPB-201ENST00000381342 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
SNRPB-201ENST00000381342 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
SNRPB-201ENST00000381342 PANO1I0J062 215 aa10.36□□□□□ -0.75
SNRPB-201ENST00000381342 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
SNRPB-201ENST00000381342 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
SNRPB-201ENST00000381342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
SNRPB-201ENST00000381342 H0Y8G0 127 aa10.35□□□□□ -0.75
SNRPB-201ENST00000381342 PLA2G1BP04054 148 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms