RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GAGE6Q13070 117 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 OXLD1Q5BKU9 147 aa13.41□□□□□ -0.26
GMDS-201ENST00000380805 PAX4O43316 350 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 TIMM17BO60830 172 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 DAD1P61803 113 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 SPANXDQ9BXN6 97 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 SPANXCQ9NY87 97 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 SPCS1Q9Y6A9 102 aa13.4□□□□□ -0.26
GMDS-201ENST00000380805 DEFB4AO15263 64 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 CHCHD5Q9BSY4 110 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 IGLV4-60A0A075B6I1 120 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 TRAV26-1A0A087WT03 109 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 ATP5G1P05496 136 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 SPART-AS1P0CW21 52 aa13.39□□□□□ -0.27
GMDS-201ENST00000380805 TEX48A0A1B0GUV7 120 aa13.37□□□□□ -0.27
GMDS-201ENST00000380805 CFC1BP0CG36 223 aa13.36□□□□□ -0.27
GMDS-201ENST00000380805 CFC1P0CG37 223 aa13.36□□□□□ -0.27
GMDS-201ENST00000380805 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
GMDS-201ENST00000380805 MGAM2Q2M2H8 2515 aa13.35□□□□□ -0.27
GMDS-201ENST00000380805 MUSTN1Q8IVN3 82 aa13.35□□□□□ -0.27
GMDS-201ENST00000380805 PGPEP1Q9NXJ5 209 aa13.35□□□□□ -0.27
GMDS-201ENST00000380805 A0A0B4J2C4 111 aa13.34□□□□□ -0.27
GMDS-201ENST00000380805 A4D1N5 150 aa13.34□□□□□ -0.27
GMDS-201ENST00000380805 MIAQ16674 131 aa13.34□□□□□ -0.27
GMDS-201ENST00000380805 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.27
GMDS-201ENST00000380805 IGHV3OR16-9A0A0B4J2B5 98 aa13.33□□□□□ -0.28
GMDS-201ENST00000380805 APOMO95445 188 aa13.33□□□□□ -0.28
GMDS-201ENST00000380805 TSPAN13O95857 204 aa13.33□□□□□ -0.28
GMDS-201ENST00000380805 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
GMDS-201ENST00000380805 NBEAL2Q6ZNJ1 2754 aa13.33□□□□□ -0.28
GMDS-201ENST00000380805 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
GMDS-201ENST00000380805 G3V4G9 280 aa13.31□□□□□ -0.28
GMDS-201ENST00000380805 EIF4EBP3O60516 100 aaPredicted RBP13.31□□□□□ -0.28
GMDS-201ENST00000380805 RBX1P62877 108 aa13.31□□□□□ -0.28
GMDS-201ENST00000380805 PRO1854Q9UHT4 67 aa13.31□□□□□ -0.28
GMDS-201ENST00000380805 IFITM1P13164 125 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 SH2D6Q7Z4S9 175 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 Q9H8V8 135 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 LINC00959A0A1B0GUT2 108 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 HERV-K104P63124 156 aa13.3□□□□□ -0.28
GMDS-201ENST00000380805 A0A087WZ39 114 aa13.29□□□□□ -0.28
GMDS-201ENST00000380805 MRPL23Q16540 153 aaKnown RBP13.29□□□□□ -0.28
GMDS-201ENST00000380805 NBEAL1Q6ZS30 2694 aa13.29□□□□□ -0.28
GMDS-201ENST00000380805 PPDPFQ9H3Y8 114 aa13.28□□□□□ -0.28
GMDS-201ENST00000380805 NOTCH1P46531 2555 aa13.28□□□□□ -0.28
GMDS-201ENST00000380805 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.28
GMDS-201ENST00000380805 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.28
GMDS-201ENST00000380805 A0A096LPF7 62 aa13.27□□□□□ -0.29
GMDS-201ENST00000380805 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
GMDS-201ENST00000380805 LYRM7Q5U5X0 104 aa13.26□□□□□ -0.29
GMDS-201ENST00000380805 ICOSQ9Y6W8 199 aa13.26□□□□□ -0.29
GMDS-201ENST00000380805 TMEM262E9PQX1 116 aa13.25□□□□□ -0.29
GMDS-201ENST00000380805 LINC01561Q8N1V8 128 aa13.25□□□□□ -0.29
GMDS-201ENST00000380805 H3BNG1 76 aa13.25□□□□□ -0.29
GMDS-201ENST00000380805 PRSS2P07478 247 aa13.25□□□□□ -0.29
GMDS-201ENST00000380805 COX7B2Q8TF08 81 aa13.25□□□□□ -0.29
GMDS-201ENST00000380805 IGKV3OR2-268A0A0C4DH90 116 aa13.24□□□□□ -0.29
GMDS-201ENST00000380805 LELP1Q5T871 98 aa13.24□□□□□ -0.29
GMDS-201ENST00000380805 SS18Q15532 418 aa13.23□□□□□ -0.29
GMDS-201ENST00000380805 RETNQ9HD89 108 aa13.23□□□□□ -0.29
GMDS-201ENST00000380805 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
GMDS-201ENST00000380805 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
GMDS-201ENST00000380805 F8W1H4 67 aa13.21□□□□□ -0.3
GMDS-201ENST00000380805 H3BMG7 143 aa13.21□□□□□ -0.3
GMDS-201ENST00000380805 LINC00308Q8TCZ7 52 aa13.21□□□□□ -0.3
GMDS-201ENST00000380805 ERG28Q9UKR5 140 aa13.21□□□□□ -0.3
GMDS-201ENST00000380805 HTN3P15516 51 aa13.2□□□□□ -0.3
GMDS-201ENST00000380805 TRBV20-1A0A075B6N2 111 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 OCIAD2Q56VL3 154 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 PRO0461Q9UI25 63 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 LOC107984156A0A0G2JMH3 177 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 ARL17AQ8IVW1 177 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 DAND5Q8N907 189 aa13.19□□□□□ -0.3
GMDS-201ENST00000380805 PRB2P02812 416 aaPredicted RBP13.18□□□□□ -0.3
GMDS-201ENST00000380805 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
GMDS-201ENST00000380805 KPRPQ5T749 579 aaPredicted RBP13.18□□□□□ -0.3
GMDS-201ENST00000380805 C5orf38Q86SI9 138 aa13.18□□□□□ -0.3
GMDS-201ENST00000380805 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
GMDS-201ENST00000380805 TRBV30A0A0K0K1B3 111 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 XCL1P47992 114 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 NPC2P61916 151 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 REG3AQ06141 175 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 SOSTDC1Q6X4U4 206 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 Q8IZM0 81 aa13.16□□□□□ -0.3
GMDS-201ENST00000380805 LYPD5Q6UWN5 251 aa13.15□□□□□ -0.3
GMDS-201ENST00000380805 TCL1BO95988 128 aa13.14□□□□□ -0.31
GMDS-201ENST00000380805 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
GMDS-201ENST00000380805 Q8N3U1 123 aa13.14□□□□□ -0.31
GMDS-201ENST00000380805 PRR34Q9NV39 138 aa13.14□□□□□ -0.31
GMDS-201ENST00000380805 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
GMDS-201ENST00000380805 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
GMDS-201ENST00000380805 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
GMDS-201ENST00000380805 Q6ZTC4 211 aa13.13□□□□□ -0.31
GMDS-201ENST00000380805 CHCHD10Q8WYQ3 142 aaPredicted RBP13.13□□□□□ -0.31
GMDS-201ENST00000380805 K7ERU9 68 aa13.12□□□□□ -0.31
GMDS-201ENST00000380805 PSMB2P49721 201 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms