RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 NUPR1O60356 82 aa10.04□□□□□ -0.8
HMGN1-203ENST00000380748 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
HMGN1-203ENST00000380748 SMKR1H3BMG3 65 aa10.03□□□□□ -0.8
HMGN1-203ENST00000380748 VCYO14598 125 aa10.03□□□□□ -0.8
HMGN1-203ENST00000380748 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 RAB4AP20338 218 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 ZNF345Q14585 488 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 KIAA0087Q14695 138 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.81
HMGN1-203ENST00000380748 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
HMGN1-203ENST00000380748 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
HMGN1-203ENST00000380748 AMN1Q8IY45 258 aa10.01□□□□□ -0.81
HMGN1-203ENST00000380748 LINC00304Q8N9R0 145 aa10.01□□□□□ -0.81
HMGN1-203ENST00000380748 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
HMGN1-203ENST00000380748 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
HMGN1-203ENST00000380748 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
HMGN1-203ENST00000380748 C22orf24Q9Y442 160 aa10□□□□□ -0.81
HMGN1-203ENST00000380748 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
HMGN1-203ENST00000380748 GATCO43716 136 aaKnown RBP9.99□□□□□ -0.81
HMGN1-203ENST00000380748 KIR2DL4Q99706 377 aa9.99□□□□□ -0.81
HMGN1-203ENST00000380748 SUMO2P61956 95 aaKnown RBP9.98□□□□□ -0.81
HMGN1-203ENST00000380748 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
HMGN1-203ENST00000380748 NRACQ8N912 160 aa9.98□□□□□ -0.81
HMGN1-203ENST00000380748 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
HMGN1-203ENST00000380748 KANTRA0A1W2PQU2 76 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 A8MWL6 223 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 BCE1O60756 84 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 LINC00469Q8N7U9 141 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
HMGN1-203ENST00000380748 IFITM10A6NMD0 228 aa9.96□□□□□ -0.82
HMGN1-203ENST00000380748 LCE2CQ5TA81 110 aa9.96□□□□□ -0.82
HMGN1-203ENST00000380748 A0A1B0GUT8 65 aa9.95□□□□□ -0.82
HMGN1-203ENST00000380748 TEX46H3BTG2 121 aa9.95□□□□□ -0.82
HMGN1-203ENST00000380748 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-203ENST00000380748 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-203ENST00000380748 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
HMGN1-203ENST00000380748 HBBP68871 147 aa9.94□□□□□ -0.82
HMGN1-203ENST00000380748 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
HMGN1-203ENST00000380748 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
HMGN1-203ENST00000380748 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
HMGN1-203ENST00000380748 PPP1R17O96001 155 aa9.92□□□□□ -0.82
HMGN1-203ENST00000380748 CT83Q5H943 113 aa9.92□□□□□ -0.82
HMGN1-203ENST00000380748 SPANXA1Q9NS26 97 aa9.92□□□□□ -0.82
HMGN1-203ENST00000380748 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
HMGN1-203ENST00000380748 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
HMGN1-203ENST00000380748 ASB16-AS1Q495Z4 193 aa9.91□□□□□ -0.82
HMGN1-203ENST00000380748 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
HMGN1-203ENST00000380748 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
HMGN1-203ENST00000380748 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
HMGN1-203ENST00000380748 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
HMGN1-203ENST00000380748 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
HMGN1-203ENST00000380748 RPL37AP8A6NKH3 93 aa9.88□□□□□ -0.83
HMGN1-203ENST00000380748 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
HMGN1-203ENST00000380748 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
HMGN1-203ENST00000380748 CTAG1AP78358 180 aa9.86□□□□□ -0.83
HMGN1-203ENST00000380748 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
HMGN1-203ENST00000380748 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
HMGN1-203ENST00000380748 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
HMGN1-203ENST00000380748 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
HMGN1-203ENST00000380748 UBE2AP49459 152 aa9.85□□□□□ -0.83
HMGN1-203ENST00000380748 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
HMGN1-203ENST00000380748 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
HMGN1-203ENST00000380748 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
HMGN1-203ENST00000380748 TCAPO15273 167 aa9.84□□□□□ -0.83
HMGN1-203ENST00000380748 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
HMGN1-203ENST00000380748 RIGQ13278 110 aa9.84□□□□□ -0.83
HMGN1-203ENST00000380748 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
HMGN1-203ENST00000380748 PRSS2P07478 247 aa9.83□□□□□ -0.84
HMGN1-203ENST00000380748 CKS1BP61024 79 aa9.83□□□□□ -0.84
HMGN1-203ENST00000380748 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
HMGN1-203ENST00000380748 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
HMGN1-203ENST00000380748 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
HMGN1-203ENST00000380748 FP248Q71RG6 208 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-203ENST00000380748 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
HMGN1-203ENST00000380748 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
HMGN1-203ENST00000380748 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
HMGN1-203ENST00000380748 C3orf22Q8N5N4 141 aa9.81□□□□□ -0.84
HMGN1-203ENST00000380748 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
HMGN1-203ENST00000380748 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-203ENST00000380748 CEBPGP53567 150 aa9.8□□□□□ -0.84
HMGN1-203ENST00000380748 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
HMGN1-203ENST00000380748 C6orf226Q5I0X4 101 aa9.8□□□□□ -0.84
HMGN1-203ENST00000380748 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
HMGN1-203ENST00000380748 CKS2P33552 79 aa9.79□□□□□ -0.84
HMGN1-203ENST00000380748 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-203ENST00000380748 ZC2HC1BQ5TFG8 222 aa9.78□□□□□ -0.84
HMGN1-203ENST00000380748 Q6ZN92 141 aa9.78□□□□□ -0.84
HMGN1-203ENST00000380748 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
HMGN1-203ENST00000380748 Q8IZM0 81 aa9.78□□□□□ -0.84
HMGN1-203ENST00000380748 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
HMGN1-203ENST00000380748 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
HMGN1-203ENST00000380748 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-203ENST00000380748 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
HMGN1-203ENST00000380748 V9GYV3 84 aa9.77□□□□□ -0.85
HMGN1-203ENST00000380748 NPYP01303 97 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms