RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 A0A096LNJ9 63 aa7.7□□□□□ -1.18
DEPDC4-202ENST00000378244 RAB5BP61020 215 aa7.7□□□□□ -1.18
DEPDC4-202ENST00000378244 FOXI1Q12951 378 aa7.7□□□□□ -1.18
DEPDC4-202ENST00000378244 C5orf52A6NGY3 159 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 C5orf38Q86SI9 138 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 LBHQ53QV2 105 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 FAM19A2Q8N3H0 131 aa7.69□□□□□ -1.18
DEPDC4-202ENST00000378244 hDV102S1A0JD36 115 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 HBDP02042 147 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 PRSS1P07477 247 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC00173Q6ZV60 143 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC00526Q96FQ7 95 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 HSBP1O75506 76 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 C2orf88Q9BSF0 95 aa7.68□□□□□ -1.18
DEPDC4-202ENST00000378244 SERF1AO75920 110 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 NDUFA6P56556 154 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 COX6A2Q02221 97 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 AMELXQ99217 191 aa7.67□□□□□ -1.18
DEPDC4-202ENST00000378244 COX7A2LO14548 114 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 NUPR1O60356 82 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BKO60814 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BJP06899 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BOP23527 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BBP33778 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BDP58876 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BCP62807 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST2H2BEQ16778 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BHQ93079 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 CHCHD1Q96BP2 118 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BNQ99877 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 HIST1H2BMQ99879 126 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 UBE2D1P51668 147 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC00310P59036 64 aa7.66□□□□□ -1.18
DEPDC4-202ENST00000378244 C14orf177Q52M58 125 aa7.65□□□□□ -1.18
DEPDC4-202ENST00000378244 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 LINC00518Q8N0U6 118 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 GCSHP23434 173 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 NTN5Q8WTR8 489 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
DEPDC4-202ENST00000378244 SLPIP03973 132 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 KRTAP10-1P60331 282 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 NPSP0C0P6 89 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 FABP4P15090 132 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 PMVKQ15126 192 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
DEPDC4-202ENST00000378244 DNAH5Q8TE73 4624 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 ATP5LO75964 103 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 HAMPP81172 84 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-202ENST00000378244 LRP1BQ9NZR2 4599 aa7.61□□□□□ -1.19
DEPDC4-202ENST00000378244 IGLV4-69A0A075B6H9 119 aa7.61□□□□□ -1.19
DEPDC4-202ENST00000378244 GVQW2A0A096LPI5 108 aaPredicted RBP7.61□□□□□ -1.19
DEPDC4-202ENST00000378244 LEPROTL1O95214 131 aa7.61□□□□□ -1.19
DEPDC4-202ENST00000378244 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
DEPDC4-202ENST00000378244 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 APOMO95445 188 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 HERVK_113P63121 156 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 IFI27L1Q96BM0 104 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 A0A087WZ39 114 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 A0A0U1RRA0 63 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 SEC61GP60059 68 aa7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 PACRGQ96M98 296 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-202ENST00000378244 SPAG11BQ08648 103 aa7.59□□□□□ -1.19
DEPDC4-202ENST00000378244 TOMM7Q9P0U1 55 aa7.59□□□□□ -1.19
DEPDC4-202ENST00000378244 SEC11AP67812 179 aa7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 CHAC1Q9BUX1 264 aa7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 IGHV3-64A0A075B6Q5 118 aa7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 CNBPP62633 177 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 C9orf163Q8N9P6 203 aa7.58□□□□□ -1.2
DEPDC4-202ENST00000378244 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
DEPDC4-202ENST00000378244 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
DEPDC4-202ENST00000378244 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
DEPDC4-202ENST00000378244 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 Q6ZRU5 148 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 OR10D4PQ8NGN7 298 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-202ENST00000378244 C11orf86A6NJI1 115 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 TMEM170BQ5T4T1 132 aa7.55□□□□□ -1.2
DEPDC4-202ENST00000378244 PMCHL2Q9BQD1 86 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms