RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
NPHP4-201ENST00000378156 H7C423 109 aa11.07□□□□□ -0.64
NPHP4-201ENST00000378156 TIMM17BO60830 172 aa11.07□□□□□ -0.64
NPHP4-201ENST00000378156 TRBV27A0A0K0K1C4 114 aa11.07□□□□□ -0.64
NPHP4-201ENST00000378156 MIFP14174 115 aa11.07□□□□□ -0.64
NPHP4-201ENST00000378156 ADAMTS20P59510 1910 aa11.06□□□□□ -0.64
NPHP4-201ENST00000378156 TRBV6-4A0A1B0GX49 114 aa11.06□□□□□ -0.64
NPHP4-201ENST00000378156 REG3AQ06141 175 aa11.06□□□□□ -0.64
NPHP4-201ENST00000378156 UBE2AP49459 152 aa11.06□□□□□ -0.64
NPHP4-201ENST00000378156 PRM2P04554 102 aa11.05□□□□□ -0.64
NPHP4-201ENST00000378156 EDN2P20800 178 aa11.05□□□□□ -0.64
NPHP4-201ENST00000378156 V9GYY9 64 aa11.05□□□□□ -0.64
NPHP4-201ENST00000378156 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
NPHP4-201ENST00000378156 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
NPHP4-201ENST00000378156 DEFB131BA0A096LNP1 70 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 A0A096LNJ9 63 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
NPHP4-201ENST00000378156 SPTSSBQ8NFR3 76 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
NPHP4-201ENST00000378156 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
NPHP4-201ENST00000378156 COX7CP15954 63 aa11.03□□□□□ -0.64
NPHP4-201ENST00000378156 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
NPHP4-201ENST00000378156 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-201ENST00000378156 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
NPHP4-201ENST00000378156 CRIP2P52943 208 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-201ENST00000378156 Q6Q795 121 aa11.03□□□□□ -0.64
NPHP4-201ENST00000378156 LST1O00453 97 aa11.02□□□□□ -0.64
NPHP4-201ENST00000378156 SEC61GP60059 68 aa11.02□□□□□ -0.64
NPHP4-201ENST00000378156 CRYGDP07320 174 aa11.02□□□□□ -0.65
NPHP4-201ENST00000378156 H0Y9J4 135 aa11.02□□□□□ -0.65
NPHP4-201ENST00000378156 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
NPHP4-201ENST00000378156 TSHBP01222 138 aa11.01□□□□□ -0.65
NPHP4-201ENST00000378156 XGP55808 180 aa11.01□□□□□ -0.65
NPHP4-201ENST00000378156 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
NPHP4-201ENST00000378156 A8MZ25 164 aa11.01□□□□□ -0.65
NPHP4-201ENST00000378156 SMR3AQ99954 134 aa11.01□□□□□ -0.65
NPHP4-201ENST00000378156 C9orf85Q96MD7 179 aa11□□□□□ -0.65
NPHP4-201ENST00000378156 ACANP16112 2415 aa11□□□□□ -0.65
NPHP4-201ENST00000378156 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11□□□□□ -0.65
NPHP4-201ENST00000378156 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
NPHP4-201ENST00000378156 BBC3Q96PG8 261 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-201ENST00000378156 PIK3CD-AS1Q5SR53 167 aa10.99□□□□□ -0.65
NPHP4-201ENST00000378156 CCDC179H3BU77 68 aa10.98□□□□□ -0.65
NPHP4-201ENST00000378156 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
NPHP4-201ENST00000378156 SLPIP03973 132 aa10.97□□□□□ -0.65
NPHP4-201ENST00000378156 ODF3L2Q3SX64 289 aa10.97□□□□□ -0.65
NPHP4-201ENST00000378156 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
NPHP4-201ENST00000378156 BRI3O95415 125 aa10.96□□□□□ -0.65
NPHP4-201ENST00000378156 PCSK5Q92824 1860 aa10.96□□□□□ -0.66
NPHP4-201ENST00000378156 IGKV4-1P06312 121 aa10.96□□□□□ -0.66
NPHP4-201ENST00000378156 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
NPHP4-201ENST00000378156 B9D2Q9BPU9 175 aa10.95□□□□□ -0.66
NPHP4-201ENST00000378156 IGIPA6NJ69 53 aa10.95□□□□□ -0.66
NPHP4-201ENST00000378156 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
NPHP4-201ENST00000378156 C6orf99Q4VX62 202 aa10.94□□□□□ -0.66
NPHP4-201ENST00000378156 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
NPHP4-201ENST00000378156 SCXQ7RTU7 201 aa10.94□□□□□ -0.66
NPHP4-201ENST00000378156 UNC80Q8N2C7 3258 aa10.94□□□□□ -0.66
NPHP4-201ENST00000378156 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
NPHP4-201ENST00000378156 C14orf177Q52M58 125 aa10.93□□□□□ -0.66
NPHP4-201ENST00000378156 Q6JHZ5 121 aa10.93□□□□□ -0.66
NPHP4-201ENST00000378156 OXLD1Q5BKU9 147 aa10.92□□□□□ -0.66
NPHP4-201ENST00000378156 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
NPHP4-201ENST00000378156 CCKP06307 115 aa10.92□□□□□ -0.66
NPHP4-201ENST00000378156 C4orf48Q5BLP8 95 aa10.92□□□□□ -0.66
NPHP4-201ENST00000378156 SMIM26A0A096LP01 95 aa10.92□□□□□ -0.66
NPHP4-201ENST00000378156 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
NPHP4-201ENST00000378156 TRAV10A0A0B4J240 114 aa10.91□□□□□ -0.66
NPHP4-201ENST00000378156 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
NPHP4-201ENST00000378156 UBE2D4Q9Y2X8 147 aa10.91□□□□□ -0.66
NPHP4-201ENST00000378156 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
NPHP4-201ENST00000378156 HIGD2AQ9BW72 106 aa10.89□□□□□ -0.67
NPHP4-201ENST00000378156 TRANK1O15050 2925 aa10.89□□□□□ -0.67
NPHP4-201ENST00000378156 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
NPHP4-201ENST00000378156 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
NPHP4-201ENST00000378156 ANKRD17O75179 2603 aaKnown RBP10.88□□□□□ -0.67
NPHP4-201ENST00000378156 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
NPHP4-201ENST00000378156 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
NPHP4-201ENST00000378156 LELP1Q5T871 98 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 FLNBO75369 2602 aaKnown RBP10.87□□□□□ -0.67
NPHP4-201ENST00000378156 UBE2D3P61077 147 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 UBE2D2P62837 147 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 PRR15LQ9BU68 103 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 SNURFQ9Y675 71 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 MUC7Q8TAX7 377 aa10.87□□□□□ -0.67
NPHP4-201ENST00000378156 Q6ZQY7 126 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 LINC00694P0DN24 101 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 UBE2D1P51668 147 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 CASC2Q6XLA1 102 aa10.86□□□□□ -0.67
NPHP4-201ENST00000378156 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
NPHP4-201ENST00000378156 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
NPHP4-201ENST00000378156 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
NPHP4-201ENST00000378156 K7ERS5 55 aa10.85□□□□□ -0.67
NPHP4-201ENST00000378156 C16orf95Q9H693 158 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms