RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 A6NDN8 102 aa12.19□□□□□ -0.46
CTTN-203ENST00000376561 K7EP13 123 aa12.18□□□□□ -0.46
CTTN-203ENST00000376561 LELP1Q5T871 98 aa12.18□□□□□ -0.46
CTTN-203ENST00000376561 Q6ZVH6 145 aa12.18□□□□□ -0.46
CTTN-203ENST00000376561 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
CTTN-203ENST00000376561 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
CTTN-203ENST00000376561 SMIM1B2RUZ4 78 aa12.17□□□□□ -0.46
CTTN-203ENST00000376561 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
CTTN-203ENST00000376561 PTTG1IPP53801 180 aa12.17□□□□□ -0.46
CTTN-203ENST00000376561 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
CTTN-203ENST00000376561 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
CTTN-203ENST00000376561 SRSF9Q13242 221 aaKnown RBP eCLIP12.16□□□□□ -0.467e-6■□□□□ 8.2
CTTN-203ENST00000376561 ZFAND6Q6FIF0 208 aa12.16□□□□□ -0.46
CTTN-203ENST00000376561 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.46
CTTN-203ENST00000376561 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
CTTN-203ENST00000376561 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
CTTN-203ENST00000376561 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
CTTN-203ENST00000376561 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
CTTN-203ENST00000376561 Q8N3U1 123 aa12.14□□□□□ -0.47
CTTN-203ENST00000376561 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
CTTN-203ENST00000376561 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
CTTN-203ENST00000376561 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
CTTN-203ENST00000376561 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
CTTN-203ENST00000376561 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
CTTN-203ENST00000376561 HUWE1Q7Z6Z7 4374 aaKnown RBP12.12□□□□□ -0.47
CTTN-203ENST00000376561 SS18Q15532 418 aa12.11□□□□□ -0.47
CTTN-203ENST00000376561 NDUFA1O15239 70 aa12.11□□□□□ -0.47
CTTN-203ENST00000376561 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 CCL25O15444 150 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 LURAP1LQ8IV03 231 aa12.1□□□□□ -0.47
CTTN-203ENST00000376561 A0A087WZ39 114 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 K7ERJ3 54 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 REG3AQ06141 175 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 XCL1P47992 114 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 LITAFQ99732 161 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 Q9H8V8 135 aa12.09□□□□□ -0.47
CTTN-203ENST00000376561 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
CTTN-203ENST00000376561 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
CTTN-203ENST00000376561 TMEM238LA0A1B0GVL6 79 aa12.07□□□□□ -0.48
CTTN-203ENST00000376561 A6NJY4 79 aa12.07□□□□□ -0.48
CTTN-203ENST00000376561 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
CTTN-203ENST00000376561 C9orf118A6NHY6 69 aa12.06□□□□□ -0.48
CTTN-203ENST00000376561 ZNF625Q96I27 306 aaPredicted RBP12.06□□□□□ -0.48
CTTN-203ENST00000376561 ESRGQ1W209 222 aa12.05□□□□□ -0.48
CTTN-203ENST00000376561 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
CTTN-203ENST00000376561 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
CTTN-203ENST00000376561 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
CTTN-203ENST00000376561 TIMM17BO60830 172 aa12.04□□□□□ -0.48
CTTN-203ENST00000376561 CHCHD10Q8WYQ3 142 aaPredicted RBP12.04□□□□□ -0.48
CTTN-203ENST00000376561 KLK12Q9UKR0 248 aa12.04□□□□□ -0.48
CTTN-203ENST00000376561 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 H3BUT2 72 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 CD164L2Q6UWJ8 174 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 MUSTN1Q8IVN3 82 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 PRR34Q9NV39 138 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
CTTN-203ENST00000376561 NAA38Q9BRA0 125 aaKnown RBP12.03□□□□□ -0.48
CTTN-203ENST00000376561 HERV-K104P63124 156 aa12.02□□□□□ -0.48
CTTN-203ENST00000376561 VAMP3Q15836 100 aa12.02□□□□□ -0.48
CTTN-203ENST00000376561 MIAQ16674 131 aa12.02□□□□□ -0.49
CTTN-203ENST00000376561 LINC01561Q8N1V8 128 aa12.02□□□□□ -0.49
CTTN-203ENST00000376561 PRSS2P07478 247 aa12.01□□□□□ -0.49
CTTN-203ENST00000376561 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
CTTN-203ENST00000376561 B9D2Q9BPU9 175 aa12.01□□□□□ -0.49
CTTN-203ENST00000376561 RPL24P83731 157 aaKnown RBP12.01□□□□□ -0.49
CTTN-203ENST00000376561 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
CTTN-203ENST00000376561 A4D1N5 150 aa12□□□□□ -0.49
CTTN-203ENST00000376561 APOMO95445 188 aa12□□□□□ -0.49
CTTN-203ENST00000376561 ENHOQ6UWT2 76 aa12□□□□□ -0.49
CTTN-203ENST00000376561 COX7A2LO14548 114 aa11.99□□□□□ -0.49
CTTN-203ENST00000376561 CFC1BP0CG36 223 aa11.99□□□□□ -0.49
CTTN-203ENST00000376561 CFC1P0CG37 223 aa11.99□□□□□ -0.49
CTTN-203ENST00000376561 DNAH9Q9NYC9 4486 aa11.98□□□□□ -0.49
CTTN-203ENST00000376561 IGLL5B9A064 214 aa11.98□□□□□ -0.49
CTTN-203ENST00000376561 MEIG1Q5JSS6 88 aa11.98□□□□□ -0.49
CTTN-203ENST00000376561 DAND5Q8N907 189 aa11.98□□□□□ -0.49
CTTN-203ENST00000376561 FOXI1Q12951 378 aa11.98□□□□□ -0.49
CTTN-203ENST00000376561 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
CTTN-203ENST00000376561 A0A1W2PPM0 123 aa11.97□□□□□ -0.49
CTTN-203ENST00000376561 NPC2P61916 151 aa11.97□□□□□ -0.49
CTTN-203ENST00000376561 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
CTTN-203ENST00000376561 CRPP02741 224 aa11.96□□□□□ -0.49
CTTN-203ENST00000376561 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
CTTN-203ENST00000376561 Q8IZM0 81 aa11.96□□□□□ -0.49
CTTN-203ENST00000376561 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
CTTN-203ENST00000376561 IFITM1P13164 125 aa11.96□□□□□ -0.49
CTTN-203ENST00000376561 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
CTTN-203ENST00000376561 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
CTTN-203ENST00000376561 MALP21145 153 aa11.95□□□□□ -0.5
CTTN-203ENST00000376561 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
CTTN-203ENST00000376561 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
CTTN-203ENST00000376561 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
CTTN-203ENST00000376561 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms