RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ZNF73O43830 326 aaPredicted RBP15.34■□□□□ 0.05
TGFBR1-202ENST00000374994 NAV2Q8IVL1 2488 aa15.33■□□□□ 0.05
TGFBR1-202ENST00000374994 NTM-AS1Q6ZSK4 140 aa15.33■□□□□ 0.04
TGFBR1-202ENST00000374994 A0A087WZ39 114 aa15.33■□□□□ 0.04
TGFBR1-202ENST00000374994 DSCAMO60469 2012 aa15.32■□□□□ 0.04
TGFBR1-202ENST00000374994 BEAN1Q3B7T3 259 aa15.32■□□□□ 0.04
TGFBR1-202ENST00000374994 ODF3L2Q3SX64 289 aa15.31■□□□□ 0.04
TGFBR1-202ENST00000374994 CEP192Q8TEP8 1941 aa15.31■□□□□ 0.04
TGFBR1-202ENST00000374994 MPLKIPQ8TAP9 179 aa15.31■□□□□ 0.04
TGFBR1-202ENST00000374994 TRAV7A0A075B6U4 112 aa15.3■□□□□ 0.04
TGFBR1-202ENST00000374994 LINC01006Q8NI28 216 aa15.3■□□□□ 0.04
TGFBR1-202ENST00000374994 DEFB131BA0A096LNP1 70 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 FAM19A1Q7Z5A9 133 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 C1orf158Q8N1D5 194 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 PRM2P04554 102 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 LINC00694P0DN24 101 aa15.29■□□□□ 0.04
TGFBR1-202ENST00000374994 Q8N814 137 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 KLK5Q9Y337 293 aaPredicted RBP15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 C18orf65Q6ZTR6 163 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 EML5Q05BV3 1969 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 SMIM26A0A096LP01 95 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 IGKV2-24A0A0C4DH68 120 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 CDIP1Q9H305 208 aa15.28■□□□□ 0.04
TGFBR1-202ENST00000374994 SNURFQ9Y675 71 aa15.26■□□□□ 0.03
TGFBR1-202ENST00000374994 HILS1P60008 231 aa15.26■□□□□ 0.03
TGFBR1-202ENST00000374994 COX6A2Q02221 97 aa15.26■□□□□ 0.03
TGFBR1-202ENST00000374994 LINC00482Q8N8I6 264 aa15.26■□□□□ 0.03
TGFBR1-202ENST00000374994 TANC2Q9HCD6 1990 aa15.25■□□□□ 0.03
TGFBR1-202ENST00000374994 CDSNQ15517 529 aa15.25■□□□□ 0.03
TGFBR1-202ENST00000374994 C3orf84H3BNL1 204 aa15.25■□□□□ 0.03
TGFBR1-202ENST00000374994 AVPP01185 164 aa15.25■□□□□ 0.03
TGFBR1-202ENST00000374994 TRBV7-7A0A0K0K1E9 115 aa15.24■□□□□ 0.03
TGFBR1-202ENST00000374994 EDN2P20800 178 aa15.24■□□□□ 0.03
TGFBR1-202ENST00000374994 SERP1Q9Y6X1 66 aa15.23■□□□□ 0.03
TGFBR1-202ENST00000374994 CYSRT1A8MQ03 144 aa15.22■□□□□ 0.03
TGFBR1-202ENST00000374994 IGKV4-1P06312 121 aa15.22■□□□□ 0.03
TGFBR1-202ENST00000374994 EGFEM1PQ0D2K5 195 aa15.21■□□□□ 0.03
TGFBR1-202ENST00000374994 WFDC10AQ9H1F0 79 aa15.21■□□□□ 0.03
TGFBR1-202ENST00000374994 A0A087WYN8 130 aa15.21■□□□□ 0.02
TGFBR1-202ENST00000374994 PTPN13Q12923 2485 aa15.21■□□□□ 0.02
TGFBR1-202ENST00000374994 LINC01561Q8N1V8 128 aa15.2■□□□□ 0.02
TGFBR1-202ENST00000374994 SORL1Q92673 2214 aa15.2■□□□□ 0.02
TGFBR1-202ENST00000374994 MRPL55Q7Z7F7 128 aaKnown RBP15.19■□□□□ 0.02
TGFBR1-202ENST00000374994 FAM19A5Q7Z5A7 132 aaPredicted RBP15.19■□□□□ 0.02
TGFBR1-202ENST00000374994 IL17DQ8TAD2 202 aa15.18■□□□□ 0.02
TGFBR1-202ENST00000374994 KPRPQ5T749 579 aaPredicted RBP15.18■□□□□ 0.02
TGFBR1-202ENST00000374994 IGKV2-28A0A075B6P5 120 aa15.17■□□□□ 0.02
TGFBR1-202ENST00000374994 IGKV2D-28P01615 120 aa15.17■□□□□ 0.02
TGFBR1-202ENST00000374994 C4orf48Q5BLP8 95 aa15.17■□□□□ 0.02
TGFBR1-202ENST00000374994 A0A087WVE0 104 aa15.17■□□□□ 0.02
TGFBR1-202ENST00000374994 PRO0461Q9UI25 63 aa15.17■□□□□ 0.02
TGFBR1-202ENST00000374994 TRAV10A0A0B4J240 114 aa15.16■□□□□ 0.02
TGFBR1-202ENST00000374994 MYO9AB2RTY4 2548 aa15.16■□□□□ 0.02
TGFBR1-202ENST00000374994 SPTSSBQ8NFR3 76 aa15.16■□□□□ 0.02
TGFBR1-202ENST00000374994 IGLV5-39A0A0G2JS06 123 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 IGLV1-51P01701 117 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 A0A1B0GUV1 79 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 IGLV4-60A0A075B6I1 120 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 LINC00315P59091 139 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 UNQ6190/PRO20217Q6UXQ8 127 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 WFDC10BQ8IUB3 73 aa15.15■□□□□ 0.02
TGFBR1-202ENST00000374994 TLN1Q9Y490 2541 aaKnown RBP15.14■□□□□ 0.01
TGFBR1-202ENST00000374994 FHL2Q14192 279 aa15.14■□□□□ 0.01
TGFBR1-202ENST00000374994 ARHGAP32A7KAX9 2087 aa15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 SONP18583 2426 aaKnown RBP15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 SEC61GP60059 68 aa15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 FAM19A4Q96LR4 140 aa15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 EXPH5Q8NEV8 1989 aa15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 LOC107984640A0A0U1RRK4 108 aa15.13■□□□□ 0.01
TGFBR1-202ENST00000374994 TRBV10-3A0A0K0K1G6 114 aa15.12■□□□□ 0.01
TGFBR1-202ENST00000374994 Q6ZSN1 163 aa15.12■□□□□ 0.01
TGFBR1-202ENST00000374994 SMCPP49901 116 aaPredicted RBP15.12■□□□□ 0.01
TGFBR1-202ENST00000374994 A0A1W2PPR1 153 aa15.1■□□□□ 0.01
TGFBR1-202ENST00000374994 A0A0U1RQV1 116 aa15.1■□□□□ 0.01
TGFBR1-202ENST00000374994 PIEZO2Q9H5I5 2752 aa15.09■□□□□ 0.01
TGFBR1-202ENST00000374994 F8WDY8 70 aa15.09■□□□□ 0.01
TGFBR1-202ENST00000374994 SBSPONQ8IVN8 264 aa15.09■□□□□ 0.01
TGFBR1-202ENST00000374994 SHISA2Q6UWI4 295 aa15.09■□□□□ 0.01
TGFBR1-202ENST00000374994 WFDC13Q8IUB5 93 aa15.09■□□□□ 0.01
TGFBR1-202ENST00000374994 A0A096LNI7 61 aa15.08■□□□□ 0
TGFBR1-202ENST00000374994 SVIPQ8NHG7 77 aa15.08■□□□□ 0
TGFBR1-202ENST00000374994 MYO18BQ8IUG5 2567 aa15.07■□□□□ 0
TGFBR1-202ENST00000374994 HRCT1Q6UXD1 115 aa15.07■□□□□ 0
TGFBR1-202ENST00000374994 LINC00846Q9NV44 126 aa15.07■□□□□ 0
TGFBR1-202ENST00000374994 Q8N3U1 123 aa15.06■□□□□ 0
TGFBR1-202ENST00000374994 LINC00337Q8N6G1 96 aa15.06■□□□□ 0
TGFBR1-202ENST00000374994 ZNF706Q9Y5V0 76 aaPredicted RBP15.06■□□□□ 0
TGFBR1-202ENST00000374994 IGF2RP11717 2491 aa15.06■□□□□ 0
TGFBR1-202ENST00000374994 CCDC168Q8NDH2 2452 aa15.06■□□□□ 0
TGFBR1-202ENST00000374994 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.05■□□□□ -0
TGFBR1-202ENST00000374994 INAFM1C9JVW0 142 aa15.04■□□□□ -0
TGFBR1-202ENST00000374994 IGLV5-45A0A087WSX0 123 aa15.04■□□□□ -0
TGFBR1-202ENST00000374994 LINC00575Q6W349 94 aa15.04■□□□□ -0
TGFBR1-202ENST00000374994 C9orf116Q5BN46 136 aaPredicted RBP15.03■□□□□ -0
TGFBR1-202ENST00000374994 ZNF843Q8N446 348 aa15.03■□□□□ -0
TGFBR1-202ENST00000374994 PRR15LQ9BU68 103 aa15.03■□□□□ -0
TGFBR1-202ENST00000374994 HIVEP3Q5T1R4 2406 aa15.03■□□□□ -0
TGFBR1-202ENST00000374994 C11orf72Q8NBR9 251 aa15.02■□□□□ -0
TGFBR1-202ENST00000374994 C1orf137Q5JT78 98 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms