RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 KRTAP10-2P60368 255 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
HSPG2-202ENST00000374676 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 COX7A2LO14548 114 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 NUPR1O60356 82 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 PRSS1P07477 247 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 SEC11AP67812 179 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 PMVKQ15126 192 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 CST9LQ9H4G1 147 aa7.44□□□□□ -1.22
HSPG2-202ENST00000374676 DNAH8Q96JB1 4490 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 GVQW2A0A096LPI5 108 aaPredicted RBP7.42□□□□□ -1.22
HSPG2-202ENST00000374676 HERVK_113P63121 156 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 COX6A2Q02221 97 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
HSPG2-202ENST00000374676 C5orf38Q86SI9 138 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
HSPG2-202ENST00000374676 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.41□□□□□ -1.22
HSPG2-202ENST00000374676 A0A087WZ39 114 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 APOMO95445 188 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 MALP21145 153 aa7.41□□□□□ -1.22
HSPG2-202ENST00000374676 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
HSPG2-202ENST00000374676 C16orf90A8MZG2 172 aa7.4□□□□□ -1.22
HSPG2-202ENST00000374676 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.22
HSPG2-202ENST00000374676 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
HSPG2-202ENST00000374676 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 SLPIP03973 132 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 IGLC3P0DOY3 106 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 GCSHP23434 173 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 FUSP35637 526 aaKnown RBP eCLIP7.39□□□□□ -1.23
HSPG2-202ENST00000374676 NDUFA6P56556 154 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
HSPG2-202ENST00000374676 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
HSPG2-202ENST00000374676 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
HSPG2-202ENST00000374676 C9orf163Q8N9P6 203 aa7.38□□□□□ -1.23
HSPG2-202ENST00000374676 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
HSPG2-202ENST00000374676 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.37□□□□□ -1.23
HSPG2-202ENST00000374676 F8WDY8 70 aa7.37□□□□□ -1.23
HSPG2-202ENST00000374676 FABP4P15090 132 aa7.37□□□□□ -1.23
HSPG2-202ENST00000374676 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
HSPG2-202ENST00000374676 C2orf48Q96LS8 159 aa7.37□□□□□ -1.23
HSPG2-202ENST00000374676 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
HSPG2-202ENST00000374676 IGLV4-69A0A075B6H9 119 aa7.36□□□□□ -1.23
HSPG2-202ENST00000374676 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
HSPG2-202ENST00000374676 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
HSPG2-202ENST00000374676 F8VRH5 84 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 CHAC1Q9BUX1 264 aa7.35□□□□□ -1.23
HSPG2-202ENST00000374676 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
HSPG2-202ENST00000374676 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
HSPG2-202ENST00000374676 H3BRM9 83 aa7.34□□□□□ -1.23
HSPG2-202ENST00000374676 ZNF22P17026 224 aaPredicted RBP7.34□□□□□ -1.23
HSPG2-202ENST00000374676 ODF1Q14990 250 aa7.34□□□□□ -1.23
HSPG2-202ENST00000374676 MAP1LC3CQ9BXW4 147 aa7.34□□□□□ -1.23
HSPG2-202ENST00000374676 MRPL35Q9NZE8 188 aaKnown RBP7.34□□□□□ -1.23
HSPG2-202ENST00000374676 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 RNF151Q2KHN1 245 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 SDIM1Q6ZPB5 146 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 Q8IZM0 81 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 CARD19Q96LW7 228 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 CAMK2N2Q96S95 79 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
HSPG2-202ENST00000374676 NDUFA1O15239 70 aa7.32□□□□□ -1.24
HSPG2-202ENST00000374676 Q6ZRU5 148 aa7.32□□□□□ -1.24
HSPG2-202ENST00000374676 RYR1P21817 5038 aa7.32□□□□□ -1.24
HSPG2-202ENST00000374676 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 H0Y8G0 127 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 S100A6P06703 90 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 PRSS2P07478 247 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 SPINK8P0C7L1 97 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 C6orf226Q5I0X4 101 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 TMEM170BQ5T4T1 132 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 Q6ZSA8 131 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
HSPG2-202ENST00000374676 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
HSPG2-202ENST00000374676 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
HSPG2-202ENST00000374676 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms