RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
VCL-202ENST00000372755 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
VCL-202ENST00000372755 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
VCL-202ENST00000372755 TRAV7A0A075B6U4 112 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 SMIM26A0A096LP01 95 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 PCNX2A6NKB5 2137 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 PRM2P04554 102 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 Q8N814 137 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 TNCP24821 2201 aa8.36□□□□□ -1.07
VCL-202ENST00000372755 Q6Q795 121 aa8.35□□□□□ -1.07
VCL-202ENST00000372755 F8WDY8 70 aa8.35□□□□□ -1.07
VCL-202ENST00000372755 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
VCL-202ENST00000372755 ADAMTS9Q9P2N4 1935 aa8.35□□□□□ -1.07
VCL-202ENST00000372755 XGP55808 180 aa8.35□□□□□ -1.07
VCL-202ENST00000372755 TRBV10-3A0A0K0K1G6 114 aa8.34□□□□□ -1.07
VCL-202ENST00000372755 FAM208BQ5VWN6 2430 aa8.34□□□□□ -1.07
VCL-202ENST00000372755 GAS8-AS1O95177 125 aa8.34□□□□□ -1.07
VCL-202ENST00000372755 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
VCL-202ENST00000372755 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
VCL-202ENST00000372755 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.08
VCL-202ENST00000372755 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
VCL-202ENST00000372755 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
VCL-202ENST00000372755 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
VCL-202ENST00000372755 ODF3L2Q3SX64 289 aa8.33□□□□□ -1.08
VCL-202ENST00000372755 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
VCL-202ENST00000372755 IGHV6-1A0A0B4J1U7 121 aa8.32□□□□□ -1.08
VCL-202ENST00000372755 TRBV7-6A0A0J9YX20 115 aa8.31□□□□□ -1.08
VCL-202ENST00000372755 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
VCL-202ENST00000372755 DSCAML1Q8TD84 2053 aa8.3□□□□□ -1.08
VCL-202ENST00000372755 ALPK3Q96L96 1907 aa8.3□□□□□ -1.08
VCL-202ENST00000372755 ZFHX2Q9C0A1 2572 aaPredicted RBP8.3□□□□□ -1.08
VCL-202ENST00000372755 PRYO14603 147 aa8.3□□□□□ -1.08
VCL-202ENST00000372755 CRIP2P52943 208 aaPredicted RBP8.3□□□□□ -1.08
VCL-202ENST00000372755 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
VCL-202ENST00000372755 ZNF106Q9H2Y7 1883 aaKnown RBP8.3□□□□□ -1.08
VCL-202ENST00000372755 PLA2G2AP14555 144 aa8.29□□□□□ -1.08
VCL-202ENST00000372755 RETNQ9HD89 108 aa8.29□□□□□ -1.08
VCL-202ENST00000372755 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
VCL-202ENST00000372755 Q9BRP9 147 aa8.29□□□□□ -1.08
VCL-202ENST00000372755 PTPRQQ9UMZ3 2332 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 NCOA6Q14686 2063 aaPredicted RBP8.28□□□□□ -1.08
VCL-202ENST00000372755 A0A087WYN8 130 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 COX6A2Q02221 97 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 FHL2Q14192 279 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
VCL-202ENST00000372755 AVPP01185 164 aa8.27□□□□□ -1.08
VCL-202ENST00000372755 LINC01547P58512 204 aaPredicted RBP8.27□□□□□ -1.08
VCL-202ENST00000372755 C2orf48Q96LS8 159 aa8.27□□□□□ -1.09
VCL-202ENST00000372755 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
VCL-202ENST00000372755 FSHBP01225 129 aa8.27□□□□□ -1.09
VCL-202ENST00000372755 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 EDN2P20800 178 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 AMELXQ99217 191 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 BRI3O95415 125 aa8.26□□□□□ -1.09
VCL-202ENST00000372755 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 X6R8D5 127 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 ARHGAP21Q5T5U3 1957 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 Q6ZTC4 211 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 PRO3102Q9H379 93 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 TECTAO75443 2155 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 ZNF580Q9UK33 172 aa8.25□□□□□ -1.09
VCL-202ENST00000372755 A0A087WVE0 104 aa8.24□□□□□ -1.09
VCL-202ENST00000372755 PRR3P79522 188 aaKnown RBP8.24□□□□□ -1.09
VCL-202ENST00000372755 PMAIP1Q13794 54 aa8.24□□□□□ -1.09
VCL-202ENST00000372755 LINC00575Q6W349 94 aa8.24□□□□□ -1.09
VCL-202ENST00000372755 Q8N3U1 123 aa8.24□□□□□ -1.09
VCL-202ENST00000372755 MUC6Q6W4X9 2439 aa8.24□□□□□ -1.09
VCL-202ENST00000372755 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 TSPEAR-AS2P59090 65 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 H0Y9P7 68 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 BEAN1Q3B7T3 259 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 C1orf134Q5TEV5 83 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 KIAA1549LQ6ZVL6 1849 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 A0A087WSZ3 146 aa8.23□□□□□ -1.09
VCL-202ENST00000372755 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
VCL-202ENST00000372755 COX8CQ7Z4L0 72 aa8.22□□□□□ -1.09
VCL-202ENST00000372755 SMR3AQ99954 134 aa8.22□□□□□ -1.09
VCL-202ENST00000372755 ANKHD1Q8IWZ3 2542 aaKnown RBP8.21□□□□□ -1.09
VCL-202ENST00000372755 CDSNQ15517 529 aa8.21□□□□□ -1.09
VCL-202ENST00000372755 NUP210LQ5VU65 1888 aa8.21□□□□□ -1.1
VCL-202ENST00000372755 FREM1Q5H8C1 2179 aa8.21□□□□□ -1.1
VCL-202ENST00000372755 SPINK1P00995 79 aa8.21□□□□□ -1.1
VCL-202ENST00000372755 LYPD5Q6UWN5 251 aa8.21□□□□□ -1.1
VCL-202ENST00000372755 HCG22E2RYF7 251 aa8.2□□□□□ -1.1
VCL-202ENST00000372755 DSCAMO60469 2012 aa8.2□□□□□ -1.1
VCL-202ENST00000372755 LINC00310P59036 64 aa8.2□□□□□ -1.1
VCL-202ENST00000372755 Q8N2B8 174 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms