RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 COX6A2Q02221 97 aa12.82□□□□□ -0.36
CD40-201ENST00000372276 MTORP42345 2549 aa12.81□□□□□ -0.36
CD40-201ENST00000372276 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
CD40-201ENST00000372276 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 FHL2Q14192 279 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 LINC00612Q8N6U2 182 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 SLC25A20O43772 301 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 WFDC10AQ9H1F0 79 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 Q9H8V8 135 aa12.8□□□□□ -0.36
CD40-201ENST00000372276 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
CD40-201ENST00000372276 C9orf66Q5T8R8 295 aa12.79□□□□□ -0.36
CD40-201ENST00000372276 MTURNQ8N3F0 131 aa12.79□□□□□ -0.36
CD40-201ENST00000372276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.79□□□□□ -0.36
CD40-201ENST00000372276 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
CD40-201ENST00000372276 F5H768 121 aa12.78□□□□□ -0.36
CD40-201ENST00000372276 H7C2G1 150 aa12.78□□□□□ -0.36
CD40-201ENST00000372276 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
CD40-201ENST00000372276 A8MZ25 164 aa12.77□□□□□ -0.36
CD40-201ENST00000372276 LINC00308Q8TCZ7 52 aa12.77□□□□□ -0.36
CD40-201ENST00000372276 ZNF625Q96I27 306 aaPredicted RBP12.77□□□□□ -0.36
CD40-201ENST00000372276 TMEM262E9PQX1 116 aa12.77□□□□□ -0.37
CD40-201ENST00000372276 LINC01620Q4KN68 170 aa12.77□□□□□ -0.37
CD40-201ENST00000372276 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
CD40-201ENST00000372276 C9JAW5 83 aa12.76□□□□□ -0.37
CD40-201ENST00000372276 TRIAP1O43715 76 aa12.76□□□□□ -0.37
CD40-201ENST00000372276 NSD1Q96L73 2696 aaPredicted RBP12.76□□□□□ -0.37
CD40-201ENST00000372276 HIVEP2P31629 2446 aa12.75□□□□□ -0.37
CD40-201ENST00000372276 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
CD40-201ENST00000372276 ANKRD29Q8N6D5 301 aa12.75□□□□□ -0.37
CD40-201ENST00000372276 MEIG1Q5JSS6 88 aa12.74□□□□□ -0.37
CD40-201ENST00000372276 LYRM9A8MSI8 78 aa12.73□□□□□ -0.37
CD40-201ENST00000372276 H3BT86 120 aa12.73□□□□□ -0.37
CD40-201ENST00000372276 RPL13AP40429 203 aaKnown RBP12.73□□□□□ -0.37
CD40-201ENST00000372276 KRTAP10-3P60369 221 aa12.73□□□□□ -0.37
CD40-201ENST00000372276 CHCHD5Q9BSY4 110 aa12.73□□□□□ -0.37
CD40-201ENST00000372276 CRLF1O75462 422 aa12.72□□□□□ -0.37
CD40-201ENST00000372276 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
CD40-201ENST00000372276 ANK3Q12955 4377 aaKnown RBP12.71□□□□□ -0.37
CD40-201ENST00000372276 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.37
CD40-201ENST00000372276 INAFM1C9JVW0 142 aa12.71□□□□□ -0.37
CD40-201ENST00000372276 GAGE6Q13070 117 aa12.71□□□□□ -0.37
CD40-201ENST00000372276 PRO0255Q9UI72 69 aa12.71□□□□□ -0.37
CD40-201ENST00000372276 A0A1B0GUV1 79 aa12.7□□□□□ -0.38
CD40-201ENST00000372276 APOC4P55056 127 aa12.7□□□□□ -0.38
CD40-201ENST00000372276 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
CD40-201ENST00000372276 CARD19Q96LW7 228 aa12.7□□□□□ -0.38
CD40-201ENST00000372276 FN1P02751 2386 aaKnown RBP12.7□□□□□ -0.38
CD40-201ENST00000372276 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
CD40-201ENST00000372276 LST1O00453 97 aa12.69□□□□□ -0.38
CD40-201ENST00000372276 NPC2P61916 151 aa12.69□□□□□ -0.38
CD40-201ENST00000372276 A0A087WZ39 114 aa12.68□□□□□ -0.38
CD40-201ENST00000372276 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
CD40-201ENST00000372276 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
CD40-201ENST00000372276 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
CD40-201ENST00000372276 X6R8D5 127 aa12.68□□□□□ -0.38
CD40-201ENST00000372276 NF1P21359 2839 aa12.67□□□□□ -0.38
CD40-201ENST00000372276 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
CD40-201ENST00000372276 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
CD40-201ENST00000372276 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
CD40-201ENST00000372276 GYPEP15421 78 aa12.66□□□□□ -0.38
CD40-201ENST00000372276 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
CD40-201ENST00000372276 SS18Q15532 418 aa12.66□□□□□ -0.38
CD40-201ENST00000372276 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
CD40-201ENST00000372276 DAND5Q8N907 189 aa12.66□□□□□ -0.38
CD40-201ENST00000372276 IBA57-AS1B1ANH7 110 aa12.65□□□□□ -0.38
CD40-201ENST00000372276 COX7A2LO14548 114 aa12.65□□□□□ -0.38
CD40-201ENST00000372276 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
CD40-201ENST00000372276 IGLV4-60A0A075B6I1 120 aa12.64□□□□□ -0.39
CD40-201ENST00000372276 CDIP1Q9H305 208 aa12.64□□□□□ -0.39
CD40-201ENST00000372276 LINC00959A0A1B0GUT2 108 aa12.63□□□□□ -0.39
CD40-201ENST00000372276 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
CD40-201ENST00000372276 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
CD40-201ENST00000372276 PAX4O43316 350 aa12.62□□□□□ -0.39
CD40-201ENST00000372276 NTN5Q8WTR8 489 aaPredicted RBP12.62□□□□□ -0.39
CD40-201ENST00000372276 MIFP14174 115 aa12.61□□□□□ -0.39
CD40-201ENST00000372276 SOSTDC1Q6X4U4 206 aa12.61□□□□□ -0.39
CD40-201ENST00000372276 TRACP01848 142 aa12.6□□□□□ -0.39
CD40-201ENST00000372276 CITED1Q99966 193 aa12.59□□□□□ -0.39
CD40-201ENST00000372276 TOMM7Q9P0U1 55 aa12.59□□□□□ -0.39
CD40-201ENST00000372276 A0A0U1RRA0 63 aa12.59□□□□□ -0.39
CD40-201ENST00000372276 CRPP02741 224 aa12.59□□□□□ -0.39
CD40-201ENST00000372276 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
CD40-201ENST00000372276 JMJD1CQ15652 2540 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 IGKV3OR2-268A0A0C4DH90 116 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 RPL28P46779 137 aaKnown RBP12.58□□□□□ -0.4
CD40-201ENST00000372276 LINC00158P58513 81 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 Q8IZM0 81 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 WFDC9Q8NEX5 89 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 CLEC2BQ92478 149 aa12.58□□□□□ -0.4
CD40-201ENST00000372276 WIPF1O43516 503 aa12.57□□□□□ -0.4
CD40-201ENST00000372276 TRAV8-4A0A0B4J246 113 aa12.56□□□□□ -0.4
CD40-201ENST00000372276 DAD1P61803 113 aa12.56□□□□□ -0.4
CD40-201ENST00000372276 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
CD40-201ENST00000372276 SND1-IT1Q9HBX3 110 aa12.56□□□□□ -0.4
CD40-201ENST00000372276 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
CD40-201ENST00000372276 ATP5G1P05496 136 aa12.55□□□□□ -0.4
CD40-201ENST00000372276 CXCL5P42830 114 aa12.55□□□□□ -0.4
CD40-201ENST00000372276 MRPL23Q16540 153 aaKnown RBP12.55□□□□□ -0.4
CD40-201ENST00000372276 C2CD3Q4AC94 2353 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms