RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 TRRAPQ9Y4A5 3859 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 TRAV12-3A0A0B4J271 114 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 PSMB8P28062 276 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 COX7A2LO14548 114 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 RPL28P46779 137 aaKnown RBP4.53□□□□□ -1.68
CLCC1-204ENST00000369968 C9orf66Q5T8R8 295 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 SERP2Q8N6R1 65 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 C9orf85Q96MD7 179 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 MAP1AP78559 2803 aaPredicted RBP4.53□□□□□ -1.68
CLCC1-204ENST00000369968 TIMM17BO60830 172 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 LENEPQ9Y5L5 61 aa4.53□□□□□ -1.68
CLCC1-204ENST00000369968 F8P00451 2351 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 IGKV2-28A0A075B6P5 120 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 IGHV1-58A0A0C4DH39 117 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 IGKV2D-28P01615 120 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 SLURP1P55000 103 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 HILS1P60008 231 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 EDN2P20800 178 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 APOC4P55056 127 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 XCL2Q9UBD3 114 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 C2CD3Q4AC94 2353 aa4.52□□□□□ -1.69
CLCC1-204ENST00000369968 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 ATOX1O00244 68 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 OR13C6PQ8NH95 151 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 LGALS3P17931 250 aaKnown RBP4.51□□□□□ -1.69
CLCC1-204ENST00000369968 SPINK13Q1W4C9 94 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 CHCHD7Q9BUK0 85 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 ZNF256Q9Y2P7 627 aaPredicted RBP4.51□□□□□ -1.69
CLCC1-204ENST00000369968 MXRA5Q9NR99 2828 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 F6UB75 175 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 K7EMT4 169 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 NPC2P61916 151 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 COX6A2Q02221 97 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 Q6JHZ5 121 aa4.51□□□□□ -1.69
CLCC1-204ENST00000369968 TRACP01848 142 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 FAM19A3Q7Z5A8 133 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 A0A087WWL8 130 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 A0A087WYN8 130 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 UNQ9165/PRO28630Q6UXU0 137 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 FAM229BQ4G0N7 80 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 C4orf3Q8WVX3 66 aa4.5□□□□□ -1.69
CLCC1-204ENST00000369968 KNCNA6PVL3 124 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 NDUFA1O15239 70 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 KRTAP3-3Q9BYR6 98 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 KRTAP3-2Q9BYR7 98 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 IGKV3OR2-268A0A0C4DH90 116 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 VCYO14598 125 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 PFN2P35080 140 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 Q6ZSN1 163 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RNASE1P07998 156 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RBMY1A1P0DJD3 496 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RBMY1CP0DJD4 496 aa4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 HELZ2Q9BYK8 2649 aaKnown RBP4.49□□□□□ -1.69
CLCC1-204ENST00000369968 A0A096LNT2 108 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 TRAV13-1A0A0B4J241 112 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 TINCRA0A1B0GVN0 87 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 DEFB130BP0DP73 79 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 DEFB130AP0DP74 79 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 CR1P17927 2039 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 RS1O15537 224 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 TRBV12-3P01733 135 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 CD28P10747 220 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
CLCC1-204ENST00000369968 PROK1P58294 105 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
CLCC1-204ENST00000369968 Q9HAA7 133 aa4.48□□□□□ -1.69
CLCC1-204ENST00000369968 DNAH1Q9P2D7 4330 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 C11orf72Q8NBR9 251 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 LINC00474Q9P2X8 69 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 PRIMA1Q86XR5 153 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 BAALC-AS2P0C853 105 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 DAD1P61803 113 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 LINC01006Q8NI28 216 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 SMR3AQ99954 134 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 LYSTQ99698 3801 aa4.47□□□□□ -1.69
CLCC1-204ENST00000369968 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.69
CLCC1-204ENST00000369968 Q1RN00 199 aa4.46□□□□□ -1.69
CLCC1-204ENST00000369968 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.69
CLCC1-204ENST00000369968 CDKN2A-AS1Q9UH64 79 aa4.46□□□□□ -1.69
CLCC1-204ENST00000369968 UBE2DNLQ8IWF7 75 aa4.46□□□□□ -1.7
CLCC1-204ENST00000369968 IGHV3-73A0A0B4J1V6 119 aa4.46□□□□□ -1.7
CLCC1-204ENST00000369968 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms