RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 H3BRN7 92 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 TRIAP1O43715 76 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 BCE1O60756 84 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 SH2D1AO60880 128 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 RNF182Q8N6D2 247 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 ORMDL2Q53FV1 153 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 C11orf44Q8N8P7 122 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 JMJD1CQ15652 2540 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 KLK15Q9H2R5 256 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 ZNF256Q9Y2P7 627 aaPredicted RBP5□□□□□ -1.61
CSDE1-204ENST00000369530 HIST2H2BDQ6DRA6 164 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 FAM19A1Q7Z5A9 133 aa5□□□□□ -1.61
CSDE1-204ENST00000369530 GAS8-AS1O95177 125 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 Q6JHZ5 121 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 TRBV12-3P01733 135 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 HERVK_113P61574 105 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 SCGB1D4Q6XE38 83 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 U3KQE9 123 aa4.99□□□□□ -1.61
CSDE1-204ENST00000369530 IGKV3-20P01619 116 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 C8orf49Q96NF6 230 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 TIMM21Q9BVV7 248 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 M0R381 172 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 TSPEAR-AS2P59090 65 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 SMIM2Q9BVW6 85 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 ICOSQ9Y6W8 199 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
CSDE1-204ENST00000369530 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 LITAFQ99732 161 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 IGIPA6NJ69 53 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 S100A4P26447 101 aaKnown RBP4.97□□□□□ -1.61
CSDE1-204ENST00000369530 NPC2P61916 151 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 TM2D3Q9BRN9 247 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 TNXBP22105 4242 aa4.97□□□□□ -1.61
CSDE1-204ENST00000369530 UNQ9165/PRO28630Q6UXU0 137 aa4.96□□□□□ -1.61
CSDE1-204ENST00000369530 FAM223BA6NKX1 122 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 LEPROTO15243 131 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 DEFB1P60022 68 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-204ENST00000369530 FAM223AQ8IWN6 122 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 HTN1P15515 57 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 RHPN1-AS1Q9BWJ2 59 aa4.96□□□□□ -1.62
CSDE1-204ENST00000369530 TMEM141Q96I45 108 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 SLC50A1Q9BRV3 221 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 PRAC2D3DTV9 90 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 GPHB5Q86YW7 130 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 C14orf178Q8N769 122 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-204ENST00000369530 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 TSHBP01222 138 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 SYNJ2BPP57105 145 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 FHL2Q14192 279 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 KLHL30-AS1Q8NEE0 82 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 ZFAND3Q9H8U3 227 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
CSDE1-204ENST00000369530 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 F6UB75 175 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 DEFB136Q30KP8 78 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 MSRB1Q9NZV6 116 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 FAM236DA0A1B0GTK5 79 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 TIMM17BO60830 172 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 GIG44P09565 113 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-204ENST00000369530 COX6CP09669 75 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 FAM236CP0DP71 79 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-204ENST00000369530 Q6ZRU5 148 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 FAT1Q14517 4588 aa4.94□□□□□ -1.62
CSDE1-204ENST00000369530 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 ZNF80P51504 273 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-204ENST00000369530 SPANXN1Q5VSR9 72 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 LINC01561Q8N1V8 128 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 COPS9Q8WXC6 57 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 DAZ1Q9NQZ3 744 aaKnown RBP4.93□□□□□ -1.62
CSDE1-204ENST00000369530 SMAD5-AS1Q9Y6J3 95 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 INAFM2P0DMQ5 153 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-204ENST00000369530 LYPD5Q6UWN5 251 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 A0A0J9YXY3 114 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 SOCS3O14543 225 aa4.93□□□□□ -1.62
CSDE1-204ENST00000369530 NDUFA4O00483 81 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 SPRY2O43597 315 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
CSDE1-204ENST00000369530 VSIG2Q96IQ7 327 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 UBE2D4Q9Y2X8 147 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 KLKP1Q107X0 134 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 DYNLRB2Q8TF09 96 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
CSDE1-204ENST00000369530 H7BZZ5 65 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms