RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CFAP161Q6P656 301 aa10.58□□□□□ -0.72
PRKN-204ENST00000366896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
PRKN-204ENST00000366896 JMJD1CQ15652 2540 aa10.58□□□□□ -0.72
PRKN-204ENST00000366896 ACYP1P07311 99 aa10.58□□□□□ -0.72
PRKN-204ENST00000366896 LINC01587Q99440 93 aa10.58□□□□□ -0.72
PRKN-204ENST00000366896 CITED2Q99967 270 aaPredicted RBP10.58□□□□□ -0.72
PRKN-204ENST00000366896 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
PRKN-204ENST00000366896 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 RS1O15537 224 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 TIRAPP58753 221 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 TMEM126AQ9H061 195 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
PRKN-204ENST00000366896 DAND5Q8N907 189 aa10.56□□□□□ -0.72
PRKN-204ENST00000366896 NDUFA1O15239 70 aa10.56□□□□□ -0.72
PRKN-204ENST00000366896 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
PRKN-204ENST00000366896 INSP01308 110 aa10.55□□□□□ -0.72
PRKN-204ENST00000366896 PRIMA1Q86XR5 153 aa10.55□□□□□ -0.72
PRKN-204ENST00000366896 FAM236AA0A1B0GUQ0 79 aa10.55□□□□□ -0.72
PRKN-204ENST00000366896 FAM236BA0A1B0GV22 79 aa10.55□□□□□ -0.72
PRKN-204ENST00000366896 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
PRKN-204ENST00000366896 DEFB114Q30KQ6 69 aa10.54□□□□□ -0.72
PRKN-204ENST00000366896 C11orf44Q8N8P7 122 aa10.54□□□□□ -0.72
PRKN-204ENST00000366896 COX7A2LO14548 114 aa10.54□□□□□ -0.72
PRKN-204ENST00000366896 FAM19A3Q7Z5A8 133 aa10.54□□□□□ -0.72
PRKN-204ENST00000366896 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
PRKN-204ENST00000366896 KRTAP10-3P60369 221 aa10.53□□□□□ -0.72
PRKN-204ENST00000366896 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
PRKN-204ENST00000366896 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
PRKN-204ENST00000366896 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
PRKN-204ENST00000366896 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
PRKN-204ENST00000366896 DYNLRB2Q8TF09 96 aa10.53□□□□□ -0.72
PRKN-204ENST00000366896 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.72
PRKN-204ENST00000366896 LINC00643Q86TS7 51 aa10.52□□□□□ -0.73
PRKN-204ENST00000366896 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
PRKN-204ENST00000366896 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
PRKN-204ENST00000366896 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
PRKN-204ENST00000366896 CSDC2Q9Y534 153 aaKnown RBP10.51□□□□□ -0.73
PRKN-204ENST00000366896 IGLV5-39A0A0G2JS06 123 aa10.5□□□□□ -0.73
PRKN-204ENST00000366896 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
PRKN-204ENST00000366896 HERVK_113P63121 156 aa10.5□□□□□ -0.73
PRKN-204ENST00000366896 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
PRKN-204ENST00000366896 A0A1W2PRX2 142 aa10.49□□□□□ -0.73
PRKN-204ENST00000366896 DAZ2Q13117 558 aaKnown RBP10.49□□□□□ -0.73
PRKN-204ENST00000366896 DAZ4Q86SG3 579 aaKnown RBP10.49□□□□□ -0.73
PRKN-204ENST00000366896 Q9H8V8 135 aa10.49□□□□□ -0.73
PRKN-204ENST00000366896 DAZ3Q9NR90 486 aaKnown RBP10.49□□□□□ -0.73
PRKN-204ENST00000366896 IGHV3OR16-12A0A075B7B8 117 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 TRACP01848 142 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 PPDPFQ9H3Y8 114 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 COX6A2Q02221 97 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
PRKN-204ENST00000366896 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
PRKN-204ENST00000366896 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
PRKN-204ENST00000366896 ATRQ13535 2644 aa10.47□□□□□ -0.73
PRKN-204ENST00000366896 UQCRQO14949 82 aa10.46□□□□□ -0.73
PRKN-204ENST00000366896 ATP5G1P05496 136 aa10.46□□□□□ -0.73
PRKN-204ENST00000366896 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.73
PRKN-204ENST00000366896 C22orf24Q9Y442 160 aa10.46□□□□□ -0.73
PRKN-204ENST00000366896 BAALC-AS2P0C853 105 aa10.46□□□□□ -0.74
PRKN-204ENST00000366896 LINC00242Q5T6M2 205 aa10.46□□□□□ -0.74
PRKN-204ENST00000366896 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.74
PRKN-204ENST00000366896 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 CXCL5P42830 114 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 ZNF625Q96I27 306 aaPredicted RBP10.45□□□□□ -0.74
PRKN-204ENST00000366896 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 RPL36AP83881 106 aaKnown RBP10.45□□□□□ -0.74
PRKN-204ENST00000366896 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 STHQ8IWL8 128 aa10.45□□□□□ -0.74
PRKN-204ENST00000366896 RPL36ALQ969Q0 106 aaKnown RBP10.45□□□□□ -0.74
PRKN-204ENST00000366896 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
PRKN-204ENST00000366896 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
PRKN-204ENST00000366896 CCL24O00175 119 aa10.44□□□□□ -0.74
PRKN-204ENST00000366896 SMIM1B2RUZ4 78 aa10.43□□□□□ -0.74
PRKN-204ENST00000366896 K7EQD1 137 aa10.43□□□□□ -0.74
PRKN-204ENST00000366896 FAM218AQ96MZ4 157 aa10.43□□□□□ -0.74
PRKN-204ENST00000366896 FBN1P35555 2871 aaKnown RBP10.43□□□□□ -0.74
PRKN-204ENST00000366896 CMC4P56277 68 aaPredicted RBP10.42□□□□□ -0.74
PRKN-204ENST00000366896 INAFM2P0DMQ5 153 aa10.42□□□□□ -0.74
PRKN-204ENST00000366896 Q6ZTI0 123 aa10.42□□□□□ -0.74
PRKN-204ENST00000366896 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
PRKN-204ENST00000366896 TENM1Q9UKZ4 2725 aa10.41□□□□□ -0.74
PRKN-204ENST00000366896 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
PRKN-204ENST00000366896 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.75
PRKN-204ENST00000366896 F5H768 121 aa10.39□□□□□ -0.75
PRKN-204ENST00000366896 COX7CP15954 63 aa10.39□□□□□ -0.75
PRKN-204ENST00000366896 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
PRKN-204ENST00000366896 HIST1H4AP62805 103 aaKnown RBP10.39□□□□□ -0.75
PRKN-204ENST00000366896 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
PRKN-204ENST00000366896 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
PRKN-204ENST00000366896 MALP21145 153 aa10.38□□□□□ -0.75
PRKN-204ENST00000366896 RPL28P46779 137 aaKnown RBP10.38□□□□□ -0.75
PRKN-204ENST00000366896 PF4P02776 101 aa10.37□□□□□ -0.75
PRKN-204ENST00000366896 Q9HAA7 133 aa10.36□□□□□ -0.75
PRKN-204ENST00000366896 TRAV13-2A0A0B4J235 113 aa10.36□□□□□ -0.75
PRKN-204ENST00000366896 CRYGAP11844 174 aa10.36□□□□□ -0.75
PRKN-204ENST00000366896 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms