RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
PRKN-202ENST00000366892 TP73-AS1Q9UF72 201 aa11.44□□□□□ -0.58
PRKN-202ENST00000366892 TRBV25-1A0A075B6N4 114 aa11.43□□□□□ -0.58
PRKN-202ENST00000366892 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
PRKN-202ENST00000366892 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
PRKN-202ENST00000366892 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
PRKN-202ENST00000366892 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
PRKN-202ENST00000366892 H3BRM9 83 aa11.41□□□□□ -0.58
PRKN-202ENST00000366892 TAX1BP3O14907 124 aa11.41□□□□□ -0.58
PRKN-202ENST00000366892 RPL39P62891 51 aaKnown RBP11.41□□□□□ -0.58
PRKN-202ENST00000366892 MYMXA0A1B0GTQ4 84 aa11.4□□□□□ -0.58
PRKN-202ENST00000366892 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
PRKN-202ENST00000366892 GTSF1LQ9H1H1 148 aa11.4□□□□□ -0.58
PRKN-202ENST00000366892 ABCA13Q86UQ4 5058 aa11.4□□□□□ -0.58
PRKN-202ENST00000366892 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 CDK2AP2O75956 126 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 COTL1Q14019 142 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 TM2D2Q9BX73 214 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 Q9UF83 564 aa11.4□□□□□ -0.59
PRKN-202ENST00000366892 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
PRKN-202ENST00000366892 LELP1Q5T871 98 aa11.39□□□□□ -0.59
PRKN-202ENST00000366892 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 GAGE12JA6NER3 117 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 GAGE4Q13068 117 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 GAGE5Q13069 117 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 GAGE13Q4V321 117 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 VCX2Q9H322 139 aa11.38□□□□□ -0.59
PRKN-202ENST00000366892 LINC00694P0DN24 101 aa11.37□□□□□ -0.59
PRKN-202ENST00000366892 RPL36AP83881 106 aaKnown RBP11.37□□□□□ -0.59
PRKN-202ENST00000366892 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
PRKN-202ENST00000366892 RPL36ALQ969Q0 106 aaKnown RBP11.37□□□□□ -0.59
PRKN-202ENST00000366892 AMELXQ99217 191 aa11.37□□□□□ -0.59
PRKN-202ENST00000366892 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
PRKN-202ENST00000366892 A0A087WTM6 91 aa11.36□□□□□ -0.59
PRKN-202ENST00000366892 MRPS36P82909 103 aaKnown RBP11.36□□□□□ -0.59
PRKN-202ENST00000366892 DAZ4Q86SG3 579 aaKnown RBP11.36□□□□□ -0.59
PRKN-202ENST00000366892 CEND1Q8N111 149 aa11.36□□□□□ -0.59
PRKN-202ENST00000366892 DAZ3Q9NR90 486 aaKnown RBP11.36□□□□□ -0.59
PRKN-202ENST00000366892 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRKN-202ENST00000366892 C9orf118A6NHY6 69 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 CHCHD7Q9BUK0 85 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 KRTAP4-5Q9BYR2 181 aa11.35□□□□□ -0.59
PRKN-202ENST00000366892 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 GCSHP23434 173 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 VAMP3Q15836 100 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
PRKN-202ENST00000366892 TMEM238LA0A1B0GVL6 79 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 A6NJY4 79 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 LEPROTO15243 131 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
PRKN-202ENST00000366892 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
PRKN-202ENST00000366892 HIST1H4GQ99525 98 aa11.32□□□□□ -0.6
PRKN-202ENST00000366892 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
PRKN-202ENST00000366892 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
PRKN-202ENST00000366892 H7C423 109 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
PRKN-202ENST00000366892 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 Q8N3U1 123 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 Q9HAA7 133 aa11.31□□□□□ -0.6
PRKN-202ENST00000366892 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 FAT1Q14517 4588 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 J3QQQ9 107 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 PSCAO43653 123 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 ZNF22P17026 224 aaPredicted RBP11.3□□□□□ -0.6
PRKN-202ENST00000366892 UBE2D3P61077 147 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 UBE2D2P62837 147 aa11.3□□□□□ -0.6
PRKN-202ENST00000366892 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
PRKN-202ENST00000366892 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
PRKN-202ENST00000366892 FXYD2P54710 66 aa11.29□□□□□ -0.6
PRKN-202ENST00000366892 DGAT2L7PQ6IED9 249 aa11.27□□□□□ -0.61
PRKN-202ENST00000366892 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
PRKN-202ENST00000366892 DNAH8Q96JB1 4490 aa11.26□□□□□ -0.61
PRKN-202ENST00000366892 Q8N1X5 172 aa11.26□□□□□ -0.61
PRKN-202ENST00000366892 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
PRKN-202ENST00000366892 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 CCL25O15444 150 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 FABP2P12104 132 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 Q6ZVH6 145 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
PRKN-202ENST00000366892 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
PRKN-202ENST00000366892 NHP2Q9NX24 153 aaKnown RBP11.25□□□□□ -0.61
PRKN-202ENST00000366892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
PRKN-202ENST00000366892 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms