RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
H3F3A-204ENST00000366816 IGIPA6NJ69 53 aa12.73□□□□□ -0.37
H3F3A-204ENST00000366816 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
H3F3A-204ENST00000366816 CHTF8P0CG12 524 aa12.73□□□□□ -0.37
H3F3A-204ENST00000366816 COX6A2Q02221 97 aa12.73□□□□□ -0.37
H3F3A-204ENST00000366816 LINC00528Q8N1L1 170 aa12.73□□□□□ -0.37
H3F3A-204ENST00000366816 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
H3F3A-204ENST00000366816 IGHV3OR16-9A0A0B4J2B5 98 aa12.72□□□□□ -0.37
H3F3A-204ENST00000366816 TEX43Q6ZNM6 134 aa12.72□□□□□ -0.37
H3F3A-204ENST00000366816 VPS13BQ7Z7G8 4022 aa12.71□□□□□ -0.37
H3F3A-204ENST00000366816 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.37
H3F3A-204ENST00000366816 LINC00173Q6ZV60 143 aa12.71□□□□□ -0.37
H3F3A-204ENST00000366816 TOMM6Q96B49 74 aa12.71□□□□□ -0.37
H3F3A-204ENST00000366816 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
H3F3A-204ENST00000366816 YPEL4Q96NS1 127 aa12.7□□□□□ -0.38
H3F3A-204ENST00000366816 VCX2Q9H322 139 aa12.7□□□□□ -0.38
H3F3A-204ENST00000366816 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 UBE2D1P51668 147 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 Q6ZN92 141 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 CARD19Q96LW7 228 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 AMELXQ99217 191 aa12.69□□□□□ -0.38
H3F3A-204ENST00000366816 G0S2P27469 103 aa12.68□□□□□ -0.38
H3F3A-204ENST00000366816 FA2HQ7L5A8 372 aa12.68□□□□□ -0.38
H3F3A-204ENST00000366816 CBLN2Q8IUK8 224 aa12.68□□□□□ -0.38
H3F3A-204ENST00000366816 C2orf88Q9BSF0 95 aa12.68□□□□□ -0.38
H3F3A-204ENST00000366816 SRRM2Q9UQ35 2752 aaKnown RBP12.67□□□□□ -0.38
H3F3A-204ENST00000366816 APOMO95445 188 aa12.67□□□□□ -0.38
H3F3A-204ENST00000366816 INAFM2P0DMQ5 153 aa12.67□□□□□ -0.38
H3F3A-204ENST00000366816 CIRBPQ14011 172 aaKnown RBP12.67□□□□□ -0.38
H3F3A-204ENST00000366816 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
H3F3A-204ENST00000366816 SCGB3A1Q96QR1 104 aa12.67□□□□□ -0.38
H3F3A-204ENST00000366816 IGKV2-24A0A0C4DH68 120 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 Q6ZRU5 148 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 SPACA4Q8TDM5 124 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 SMCO4Q9NRQ5 59 aa12.66□□□□□ -0.38
H3F3A-204ENST00000366816 NPSP0C0P6 89 aa12.65□□□□□ -0.38
H3F3A-204ENST00000366816 ERASQ7Z444 233 aa12.65□□□□□ -0.38
H3F3A-204ENST00000366816 URB1-AS1Q96HZ7 61 aa12.65□□□□□ -0.38
H3F3A-204ENST00000366816 TIMM17AQ99595 171 aa12.65□□□□□ -0.38
H3F3A-204ENST00000366816 A0A087WYN8 130 aa12.64□□□□□ -0.39
H3F3A-204ENST00000366816 A0A087WZ39 114 aa12.64□□□□□ -0.39
H3F3A-204ENST00000366816 A0A096LNI7 61 aa12.64□□□□□ -0.39
H3F3A-204ENST00000366816 OR10D4PQ8NGN7 298 aa12.64□□□□□ -0.39
H3F3A-204ENST00000366816 PLA2G1BP04054 148 aaKnown RBP12.63□□□□□ -0.39
H3F3A-204ENST00000366816 MAJINQ3KP22 176 aa12.63□□□□□ -0.39
H3F3A-204ENST00000366816 C2orf48Q96LS8 159 aa12.63□□□□□ -0.39
H3F3A-204ENST00000366816 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
H3F3A-204ENST00000366816 PAPPA-AS1Q5QFB9 102 aa12.62□□□□□ -0.39
H3F3A-204ENST00000366816 LINC00614P0C842 121 aa12.6□□□□□ -0.39
H3F3A-204ENST00000366816 PMCHL1Q16048 86 aa12.6□□□□□ -0.39
H3F3A-204ENST00000366816 A0A096LNJ9 63 aa12.59□□□□□ -0.39
H3F3A-204ENST00000366816 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-204ENST00000366816 C10orf25Q5T742 122 aa12.59□□□□□ -0.39
H3F3A-204ENST00000366816 FAM19A3Q7Z5A8 133 aa12.59□□□□□ -0.39
H3F3A-204ENST00000366816 GAGE2BQ13066 116 aa12.58□□□□□ -0.4
H3F3A-204ENST00000366816 KIAA0087Q14695 138 aa12.58□□□□□ -0.4
H3F3A-204ENST00000366816 UNQ6190/PRO20217Q6UXQ8 127 aa12.58□□□□□ -0.4
H3F3A-204ENST00000366816 STPG4Q8N801 248 aa12.58□□□□□ -0.4
H3F3A-204ENST00000366816 PLAC8Q9NZF1 115 aa12.58□□□□□ -0.4
H3F3A-204ENST00000366816 LOC107984640A0A0U1RRK4 108 aa12.57□□□□□ -0.4
H3F3A-204ENST00000366816 LINC01549A6NIU2 74 aa12.57□□□□□ -0.4
H3F3A-204ENST00000366816 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
H3F3A-204ENST00000366816 CST9LQ9H4G1 147 aa12.57□□□□□ -0.4
H3F3A-204ENST00000366816 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
H3F3A-204ENST00000366816 HERVK_113P63121 156 aa12.56□□□□□ -0.4
H3F3A-204ENST00000366816 C2orf82Q6UX34 121 aa12.56□□□□□ -0.4
H3F3A-204ENST00000366816 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
H3F3A-204ENST00000366816 NDUFA1O15239 70 aa12.55□□□□□ -0.4
H3F3A-204ENST00000366816 PTTG1IPP53801 180 aa12.55□□□□□ -0.4
H3F3A-204ENST00000366816 RPL37AP61513 92 aaKnown RBP12.55□□□□□ -0.4
H3F3A-204ENST00000366816 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
H3F3A-204ENST00000366816 MRPL35Q9NZE8 188 aaKnown RBP12.55□□□□□ -0.4
H3F3A-204ENST00000366816 RAB5BP61020 215 aa12.54□□□□□ -0.4
H3F3A-204ENST00000366816 SEC11AP67812 179 aa12.54□□□□□ -0.4
H3F3A-204ENST00000366816 RPL18AQ02543 176 aaKnown RBP12.54□□□□□ -0.4
H3F3A-204ENST00000366816 TOMM7Q9P0U1 55 aa12.54□□□□□ -0.4
H3F3A-204ENST00000366816 C6orf48Q9UBA6 75 aa12.54□□□□□ -0.4
H3F3A-204ENST00000366816 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
H3F3A-204ENST00000366816 HBDP02042 147 aa12.53□□□□□ -0.4
H3F3A-204ENST00000366816 PMVKQ15126 192 aa12.53□□□□□ -0.4
H3F3A-204ENST00000366816 RNF151Q2KHN1 245 aa12.53□□□□□ -0.4
H3F3A-204ENST00000366816 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
H3F3A-204ENST00000366816 FLG2Q5D862 2391 aaPredicted RBP12.52□□□□□ -0.4
H3F3A-204ENST00000366816 TINCRA0A1B0GVN0 87 aa12.52□□□□□ -0.41
H3F3A-204ENST00000366816 F8WDY8 70 aa12.52□□□□□ -0.41
H3F3A-204ENST00000366816 TRGC2P03986 189 aa12.52□□□□□ -0.41
H3F3A-204ENST00000366816 NDUFA6P56556 154 aa12.52□□□□□ -0.41
H3F3A-204ENST00000366816 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.41
H3F3A-204ENST00000366816 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
H3F3A-204ENST00000366816 PRSS2P07478 247 aa12.5□□□□□ -0.41
H3F3A-204ENST00000366816 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
H3F3A-204ENST00000366816 A0A1W2PNN7 141 aa12.49□□□□□ -0.41
H3F3A-204ENST00000366816 COLCA2A8K830 154 aa12.49□□□□□ -0.41
H3F3A-204ENST00000366816 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
H3F3A-204ENST00000366816 MYCBP2O75592 4640 aa12.48□□□□□ -0.41
H3F3A-204ENST00000366816 HNRNPA3P51991 378 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms