RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LOC100131303A0A0U1RQF7 123 aa16.01■□□□□ 0.15
LDB1-201ENST00000361198 TRIAP1O43715 76 aa16■□□□□ 0.15
LDB1-201ENST00000361198 CRLF1O75462 422 aa16■□□□□ 0.15
LDB1-201ENST00000361198 NBEAL2Q6ZNJ1 2754 aa16■□□□□ 0.15
LDB1-201ENST00000361198 TRRAPQ9Y4A5 3859 aa16■□□□□ 0.15
LDB1-201ENST00000361198 C9orf66Q5T8R8 295 aa15.99■□□□□ 0.15
LDB1-201ENST00000361198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.99■□□□□ 0.15
LDB1-201ENST00000361198 TRBV6-4A0A1B0GX49 114 aa15.99■□□□□ 0.15
LDB1-201ENST00000361198 TEP1Q99973 2627 aaKnown RBP15.99■□□□□ 0.15
LDB1-201ENST00000361198 TRGV4A0A0C4DH28 118 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 NDUFA1O15239 70 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 LINC01620Q4KN68 170 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 TMEM101Q96IK0 257 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 CIDEAO60543 219 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 IFITM1P13164 125 aa15.98■□□□□ 0.15
LDB1-201ENST00000361198 FAM19A3Q7Z5A8 133 aa15.97■□□□□ 0.15
LDB1-201ENST00000361198 CSDC2Q9Y534 153 aaKnown RBP15.97■□□□□ 0.15
LDB1-201ENST00000361198 FHL2Q14192 279 aa15.97■□□□□ 0.15
LDB1-201ENST00000361198 IGLV5-39A0A0G2JS06 123 aa15.96■□□□□ 0.15
LDB1-201ENST00000361198 COX6A2Q02221 97 aa15.96■□□□□ 0.15
LDB1-201ENST00000361198 HERVK_113P63121 156 aa15.96■□□□□ 0.14
LDB1-201ENST00000361198 CITED1Q99966 193 aa15.96■□□□□ 0.14
LDB1-201ENST00000361198 ICOSQ9Y6W8 199 aa15.96■□□□□ 0.14
LDB1-201ENST00000361198 XGP55808 180 aa15.95■□□□□ 0.14
LDB1-201ENST00000361198 LINC00242Q5T6M2 205 aa15.95■□□□□ 0.14
LDB1-201ENST00000361198 TMEM262E9PQX1 116 aa15.94■□□□□ 0.14
LDB1-201ENST00000361198 DEFB130BP0DP73 79 aa15.94■□□□□ 0.14
LDB1-201ENST00000361198 DEFB130AP0DP74 79 aa15.94■□□□□ 0.14
LDB1-201ENST00000361198 X6R8D5 127 aa15.94■□□□□ 0.14
LDB1-201ENST00000361198 TRBV10-2A0A0K0K1G8 114 aa15.93■□□□□ 0.14
LDB1-201ENST00000361198 MT-ATP8P03928 68 aa15.93■□□□□ 0.14
LDB1-201ENST00000361198 CDC42SE2Q9NRR3 84 aa15.92■□□□□ 0.14
LDB1-201ENST00000361198 KIR2DL5BQ8NHK3 375 aa15.92■□□□□ 0.14
LDB1-201ENST00000361198 TMEM243Q9BU79 118 aa15.92■□□□□ 0.14
LDB1-201ENST00000361198 A0A1B0GV72 72 aa15.91■□□□□ 0.14
LDB1-201ENST00000361198 COX6CP09669 75 aa15.91■□□□□ 0.14
LDB1-201ENST00000361198 NPC2P61916 151 aa15.91■□□□□ 0.14
LDB1-201ENST00000361198 TRAV13-1A0A0B4J241 112 aa15.9■□□□□ 0.14
LDB1-201ENST00000361198 UBE2L6O14933 153 aa15.9■□□□□ 0.14
LDB1-201ENST00000361198 RPL13AP40429 203 aaKnown RBP15.9■□□□□ 0.14
LDB1-201ENST00000361198 CIRBPQ14011 172 aaKnown RBP15.9■□□□□ 0.14
LDB1-201ENST00000361198 LINC00612Q8N6U2 182 aa15.89■□□□□ 0.13
LDB1-201ENST00000361198 NTN5Q8WTR8 489 aaPredicted RBP15.89■□□□□ 0.13
LDB1-201ENST00000361198 F8P00451 2351 aa15.89■□□□□ 0.13
LDB1-201ENST00000361198 Q9H8V8 135 aa15.88■□□□□ 0.13
LDB1-201ENST00000361198 SMIM1B2RUZ4 78 aa15.88■□□□□ 0.13
LDB1-201ENST00000361198 DAND5Q8N907 189 aa15.88■□□□□ 0.13
LDB1-201ENST00000361198 FLNBO75369 2602 aaKnown RBP15.87■□□□□ 0.13
LDB1-201ENST00000361198 SMIM9A6NGZ8 99 aa15.86■□□□□ 0.13
LDB1-201ENST00000361198 H7C423 109 aa15.85■□□□□ 0.13
LDB1-201ENST00000361198 LINC00308Q8TCZ7 52 aa15.85■□□□□ 0.13
LDB1-201ENST00000361198 LST1O00453 97 aa15.85■□□□□ 0.13
LDB1-201ENST00000361198 CKS1BP61024 79 aa15.85■□□□□ 0.13
LDB1-201ENST00000361198 DEFB135Q30KP9 77 aa15.85■□□□□ 0.13
LDB1-201ENST00000361198 TRBV6-8A0A0A6YYG3 113 aa15.84■□□□□ 0.13
LDB1-201ENST00000361198 H3BT86 120 aa15.84■□□□□ 0.13
LDB1-201ENST00000361198 F5H768 121 aa15.84■□□□□ 0.13
LDB1-201ENST00000361198 GAGE6Q13070 117 aa15.83■□□□□ 0.13
LDB1-201ENST00000361198 ZNF625Q96I27 306 aaPredicted RBP15.83■□□□□ 0.13
LDB1-201ENST00000361198 TEX49A0A1B0GTD5 131 aa15.83■□□□□ 0.12
LDB1-201ENST00000361198 C2orf82Q6UX34 121 aa15.83■□□□□ 0.12
LDB1-201ENST00000361198 FAM222AQ5U5X8 452 aa15.82■□□□□ 0.12
LDB1-201ENST00000361198 CLEC2BQ92478 149 aa15.82■□□□□ 0.12
LDB1-201ENST00000361198 WFDC9Q8NEX5 89 aa15.81■□□□□ 0.12
LDB1-201ENST00000361198 COPS9Q8WXC6 57 aa15.81■□□□□ 0.12
LDB1-201ENST00000361198 DEFB4AO15263 64 aa15.8■□□□□ 0.12
LDB1-201ENST00000361198 GYPEP15421 78 aa15.8■□□□□ 0.12
LDB1-201ENST00000361198 UBE2WQ96B02 151 aa15.8■□□□□ 0.12
LDB1-201ENST00000361198 IGLV4-60A0A075B6I1 120 aa15.79■□□□□ 0.12
LDB1-201ENST00000361198 APOC4P55056 127 aa15.79■□□□□ 0.12
LDB1-201ENST00000361198 CHCHD5Q9BSY4 110 aa15.79■□□□□ 0.12
LDB1-201ENST00000361198 PPDPFQ9H3Y8 114 aa15.79■□□□□ 0.12
LDB1-201ENST00000361198 SOSTDC1Q6X4U4 206 aa15.79■□□□□ 0.12
LDB1-201ENST00000361198 HERV-K104P63124 156 aa15.78■□□□□ 0.12
LDB1-201ENST00000361198 PRIMA1Q86XR5 153 aa15.78■□□□□ 0.12
LDB1-201ENST00000361198 LYRM9A8MSI8 78 aa15.77■□□□□ 0.12
LDB1-201ENST00000361198 PRO0255Q9UI72 69 aa15.77■□□□□ 0.11
LDB1-201ENST00000361198 IGKV3OR2-268A0A0C4DH90 116 aa15.75■□□□□ 0.11
LDB1-201ENST00000361198 SHISA2Q6UWI4 295 aa15.75■□□□□ 0.11
LDB1-201ENST00000361198 IGHV4-28A0A0C4DH34 117 aa15.75■□□□□ 0.11
LDB1-201ENST00000361198 A0A0U1RRA0 63 aa15.74■□□□□ 0.11
LDB1-201ENST00000361198 DEFB121Q5J5C9 76 aa15.74■□□□□ 0.11
LDB1-201ENST00000361198 TRAV8-4A0A0B4J246 113 aa15.74■□□□□ 0.11
LDB1-201ENST00000361198 MEIG1Q5JSS6 88 aa15.74■□□□□ 0.11
LDB1-201ENST00000361198 WIPF1O43516 503 aa15.73■□□□□ 0.11
LDB1-201ENST00000361198 A0A096LPF7 62 aa15.72■□□□□ 0.11
LDB1-201ENST00000361198 COX7A2LO14548 114 aa15.72■□□□□ 0.11
LDB1-201ENST00000361198 IGHV4-30-4P0DP06 118 aa15.71■□□□□ 0.11
LDB1-201ENST00000361198 Q8NAQ8 132 aa15.71■□□□□ 0.11
LDB1-201ENST00000361198 PAX4O43316 350 aa15.7■□□□□ 0.1
LDB1-201ENST00000361198 CELA1Q9UNI1 258 aa15.69■□□□□ 0.1
LDB1-201ENST00000361198 SNCGO76070 127 aa15.69■□□□□ 0.1
LDB1-201ENST00000361198 FAM240AA0A1B0GVK7 77 aa15.68■□□□□ 0.1
LDB1-201ENST00000361198 MIFP14174 115 aa15.68■□□□□ 0.1
LDB1-201ENST00000361198 DAD1P61803 113 aa15.68■□□□□ 0.1
LDB1-201ENST00000361198 IGHV3OR16-9A0A0B4J2B5 98 aa15.66■□□□□ 0.1
LDB1-201ENST00000361198 Q6Q795 121 aa15.65■□□□□ 0.1
LDB1-201ENST00000361198 COX7B2Q8TF08 81 aa15.65■□□□□ 0.1
LDB1-201ENST00000361198 GAGE2BQ13066 116 aa15.65■□□□□ 0.1
LDB1-201ENST00000361198 GAGE2EQ4V326 116 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms