RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
SMC5-201ENST00000361138 PCNX1Q96RV3 2341 aa10.06□□□□□ -0.8
SMC5-201ENST00000361138 Q6ZSN1 163 aa10.06□□□□□ -0.8
SMC5-201ENST00000361138 BBC3Q96PG8 261 aaPredicted RBP10.05□□□□□ -0.8
SMC5-201ENST00000361138 LINC00846Q9NV44 126 aa10.05□□□□□ -0.8
SMC5-201ENST00000361138 ADAMTS20P59510 1910 aa10.05□□□□□ -0.8
SMC5-201ENST00000361138 H0Y9J4 135 aa10.05□□□□□ -0.8
SMC5-201ENST00000361138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.05□□□□□ -0.8
SMC5-201ENST00000361138 BRI3O95415 125 aa10.04□□□□□ -0.8
SMC5-201ENST00000361138 MRPL55Q7Z7F7 128 aaKnown RBP10.04□□□□□ -0.8
SMC5-201ENST00000361138 PRR14LQ5THK1 2151 aa10.04□□□□□ -0.8
SMC5-201ENST00000361138 DSCAMO60469 2012 aa10.04□□□□□ -0.8
SMC5-201ENST00000361138 UBE2AP49459 152 aa10.04□□□□□ -0.8
SMC5-201ENST00000361138 NAV3Q8IVL0 2385 aa10.04□□□□□ -0.8
SMC5-201ENST00000361138 C1orf158Q8N1D5 194 aa10.03□□□□□ -0.8
SMC5-201ENST00000361138 A0A087WZ39 114 aa10.03□□□□□ -0.8
SMC5-201ENST00000361138 M0R378 163 aa10.03□□□□□ -0.8
SMC5-201ENST00000361138 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
SMC5-201ENST00000361138 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.8
SMC5-201ENST00000361138 CRYGAP11844 174 aa10.02□□□□□ -0.81
SMC5-201ENST00000361138 LINC00315P59091 139 aa10.02□□□□□ -0.81
SMC5-201ENST00000361138 PLCE1Q9P212 2302 aa10.02□□□□□ -0.81
SMC5-201ENST00000361138 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
SMC5-201ENST00000361138 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
SMC5-201ENST00000361138 CDSNQ15517 529 aa10□□□□□ -0.81
SMC5-201ENST00000361138 WFDC10BQ8IUB3 73 aa10□□□□□ -0.81
SMC5-201ENST00000361138 PRR3P79522 188 aaKnown RBP10□□□□□ -0.81
SMC5-201ENST00000361138 FAM19A1Q7Z5A9 133 aa10□□□□□ -0.81
SMC5-201ENST00000361138 HILS1P60008 231 aa10□□□□□ -0.81
SMC5-201ENST00000361138 BEAN1Q3B7T3 259 aa10□□□□□ -0.81
SMC5-201ENST00000361138 NBASA2RRP1 2371 aa9.99□□□□□ -0.81
SMC5-201ENST00000361138 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
SMC5-201ENST00000361138 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
SMC5-201ENST00000361138 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
SMC5-201ENST00000361138 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
SMC5-201ENST00000361138 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
SMC5-201ENST00000361138 PRYO14603 147 aa9.97□□□□□ -0.81
SMC5-201ENST00000361138 SOSTDC1Q6X4U4 206 aa9.97□□□□□ -0.81
SMC5-201ENST00000361138 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
SMC5-201ENST00000361138 IGKV2-28A0A075B6P5 120 aa9.96□□□□□ -0.81
SMC5-201ENST00000361138 IGKV2D-28P01615 120 aa9.96□□□□□ -0.81
SMC5-201ENST00000361138 Q8N3U1 123 aa9.96□□□□□ -0.81
SMC5-201ENST00000361138 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.82
SMC5-201ENST00000361138 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
SMC5-201ENST00000361138 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 B9D2Q9BPU9 175 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 BDP1A6H8Y1 2624 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 FHL3Q13643 280 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 CYSRT1A8MQ03 144 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 ABCA4P78363 2273 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 Q8N2B8 174 aa9.95□□□□□ -0.82
SMC5-201ENST00000361138 LELP1Q5T871 98 aa9.94□□□□□ -0.82
SMC5-201ENST00000361138 PRR4Q16378 134 aa9.94□□□□□ -0.82
SMC5-201ENST00000361138 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
SMC5-201ENST00000361138 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
SMC5-201ENST00000361138 HIGD2AQ9BW72 106 aa9.94□□□□□ -0.82
SMC5-201ENST00000361138 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 AVPP01185 164 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 LINC01547P58512 204 aaPredicted RBP9.93□□□□□ -0.82
SMC5-201ENST00000361138 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 Q6ZVQ6 151 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 CELA1Q9UNI1 258 aa9.93□□□□□ -0.82
SMC5-201ENST00000361138 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
SMC5-201ENST00000361138 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
SMC5-201ENST00000361138 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
SMC5-201ENST00000361138 WFDC13Q8IUB5 93 aa9.92□□□□□ -0.82
SMC5-201ENST00000361138 TRBV7-6A0A0J9YX20 115 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 FHL2Q14192 279 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 C4orf26Q17RF5 130 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 LRCOL1A6NCL2 159 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 MED13LQ71F56 2210 aa9.91□□□□□ -0.82
SMC5-201ENST00000361138 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
SMC5-201ENST00000361138 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
SMC5-201ENST00000361138 SPTAN1Q13813 2472 aaKnown RBP9.9□□□□□ -0.82
SMC5-201ENST00000361138 PRO0628Q9UI54 55 aa9.9□□□□□ -0.83
SMC5-201ENST00000361138 CXCL6P80162 114 aa9.89□□□□□ -0.83
SMC5-201ENST00000361138 A6NED7 52 aa9.89□□□□□ -0.83
SMC5-201ENST00000361138 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
SMC5-201ENST00000361138 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
SMC5-201ENST00000361138 BPTFQ12830 3046 aa9.88□□□□□ -0.83
SMC5-201ENST00000361138 LITAFQ99732 161 aa9.88□□□□□ -0.83
SMC5-201ENST00000361138 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
SMC5-201ENST00000361138 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
SMC5-201ENST00000361138 SMCR5Q8TEV8 140 aa9.87□□□□□ -0.83
SMC5-201ENST00000361138 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
SMC5-201ENST00000361138 AGRNO00468 2067 aa9.86□□□□□ -0.83
SMC5-201ENST00000361138 A0A0J9YWU9 116 aa9.86□□□□□ -0.83
SMC5-201ENST00000361138 NHLRC4P0CG21 123 aaPredicted RBP9.85□□□□□ -0.83
SMC5-201ENST00000361138 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 A0A096LNI7 61 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 A0A1W2PPR1 153 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■□ 23
SMC5-201ENST00000361138 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 BCE1O60756 84 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 C6orf223Q8N319 242 aa9.84□□□□□ -0.83
SMC5-201ENST00000361138 LINC01006Q8NI28 216 aa9.84□□□□□ -0.84
SMC5-201ENST00000361138 A8MTW9 85 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms