RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 MRGPRG-AS1Q2M3A8 158 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 C4orf3Q8WVX3 66 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 NDUFS5O43920 106 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 UBE2D1P51668 147 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 C10orf99Q6UWK7 81 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 NEXN-AS1Q8NBZ9 246 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
SIN3A-201ENST00000360439 RAI1Q7Z5J4 1906 aaPredicted RBP7.38□□□□□ -1.23
SIN3A-201ENST00000360439 MIFP14174 115 aa7.38□□□□□ -1.23
SIN3A-201ENST00000360439 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
SIN3A-201ENST00000360439 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
SIN3A-201ENST00000360439 TRBV30A0A0K0K1B3 111 aa7.38□□□□□ -1.23
SIN3A-201ENST00000360439 CFHR3Q02985 330 aa7.38□□□□□ -1.23
SIN3A-201ENST00000360439 Q6ZS46 218 aa7.38□□□□□ -1.23
SIN3A-201ENST00000360439 TMEM61Q8N0U2 210 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 RBM12B-AS1Q9P1G2 102 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 KLK9Q9UKQ9 250 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 AKAP13Q12802 2813 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 K7EMT4 169 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 ESRGQ1W209 222 aa7.37□□□□□ -1.23
SIN3A-201ENST00000360439 VPS13AQ96RL7 3174 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 A0A087WWL8 130 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 ZNF876PQ49A33 203 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 PIK3CD-AS1Q5SR53 167 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 SCXQ7RTU7 201 aa7.36□□□□□ -1.23
SIN3A-201ENST00000360439 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 NKAPP1Q8N9T2 125 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 LST1O00453 97 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 IGF1P05019 195 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 Q6JHZ5 121 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 NRACQ8N912 160 aa7.35□□□□□ -1.23
SIN3A-201ENST00000360439 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
SIN3A-201ENST00000360439 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 A0A096LNJ9 63 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 NCR3O14931 201 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 LECT2O14960 151 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 GPHB5Q86YW7 130 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 ZNF702PQ9H963 129 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 TET2Q6N021 2002 aaPredicted RBP7.34□□□□□ -1.23
SIN3A-201ENST00000360439 UNQ9165/PRO28630Q6UXU0 137 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 ORMDL1Q9P0S3 153 aa7.34□□□□□ -1.23
SIN3A-201ENST00000360439 DCANP1Q8TF63 244 aa7.34□□□□□ -1.24
SIN3A-201ENST00000360439 GNRH2O43555 120 aa7.33□□□□□ -1.24
SIN3A-201ENST00000360439 ZNF706Q9Y5V0 76 aaPredicted RBP7.33□□□□□ -1.24
SIN3A-201ENST00000360439 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
SIN3A-201ENST00000360439 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
SIN3A-201ENST00000360439 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
SIN3A-201ENST00000360439 CHD6Q8TD26 2715 aa7.32□□□□□ -1.24
SIN3A-201ENST00000360439 A0A0J9YXV3 536 aa7.32□□□□□ -1.24
SIN3A-201ENST00000360439 POM121L12Q8N7R1 296 aa7.32□□□□□ -1.24
SIN3A-201ENST00000360439 TMEM263Q8WUH6 116 aaKnown RBP7.32□□□□□ -1.24
SIN3A-201ENST00000360439 ZNF73O43830 326 aaPredicted RBP7.31□□□□□ -1.24
SIN3A-201ENST00000360439 DEFB135Q30KP9 77 aa7.31□□□□□ -1.24
SIN3A-201ENST00000360439 SBSPONQ8IVN8 264 aa7.31□□□□□ -1.24
SIN3A-201ENST00000360439 KTN1-AS1Q86SY8 53 aa7.31□□□□□ -1.24
SIN3A-201ENST00000360439 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
SIN3A-201ENST00000360439 IGHV3-16A0A0C4DH30 117 aa7.3□□□□□ -1.24
SIN3A-201ENST00000360439 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
SIN3A-201ENST00000360439 BEAN1Q3B7T3 259 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 PSCAO43653 123 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 SLPIP03973 132 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 C18orf65Q6ZTR6 163 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 IGLV2-18A0A075B6J9 118 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 DEFB4AO15263 64 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
SIN3A-201ENST00000360439 ATP5EP2Q5VTU8 51 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 IGSF10Q6WRI0 2623 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 NOP10Q9NPE3 64 aaKnown RBP7.28□□□□□ -1.24
SIN3A-201ENST00000360439 ITPR3Q14573 2671 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 OXTP01178 125 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
SIN3A-201ENST00000360439 DEFB1P60022 68 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 Q9H8V8 135 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 A0A096LPF7 62 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 TEP1Q99973 2627 aaKnown RBP7.27□□□□□ -1.25
SIN3A-201ENST00000360439 LAMA1P25391 3075 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 LINC00846Q9NV44 126 aa7.27□□□□□ -1.25
SIN3A-201ENST00000360439 FLNAP21333 2647 aaKnown RBP7.26□□□□□ -1.25
SIN3A-201ENST00000360439 C20orf203Q8NBC4 194 aa7.26□□□□□ -1.25
SIN3A-201ENST00000360439 KLK9Q2XQG4 91 aa7.26□□□□□ -1.25
SIN3A-201ENST00000360439 COL27A1Q8IZC6 1860 aaPredicted RBP7.25□□□□□ -1.25
SIN3A-201ENST00000360439 SMCR5Q8TEV8 140 aa7.25□□□□□ -1.25
SIN3A-201ENST00000360439 OPRPNQ99935 248 aaPredicted RBP7.25□□□□□ -1.25
SIN3A-201ENST00000360439 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
SIN3A-201ENST00000360439 GAS8-AS1O95177 125 aa7.25□□□□□ -1.25
SIN3A-201ENST00000360439 DEFB114Q30KQ6 69 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms