RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 ZNF462Q96JM2 2506 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 LINC00467Q9BRT7 94 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 MUC4Q99102 2169 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 SLURP1P55000 103 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 BRK1Q8WUW1 75 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 UBL5Q9BZL1 73 aa7.31□□□□□ -1.24
RNF40-202ENST00000357890 J3QLI3 93 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 AVPP01185 164 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 TMEM258P61165 79 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 CFHR3Q02985 330 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 S100A7L2Q5SY68 101 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 APRG1Q8IVJ8 170 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 KIF25-AS1Q9Y6Z4 181 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 TMEM89A2RUT3 159 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 PSMB8P28062 276 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 LINC00315P59091 139 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 SMCR5Q8TEV8 140 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 K7EQG2 157 aa7.3□□□□□ -1.24
RNF40-202ENST00000357890 ANKRD17O75179 2603 aaKnown RBP7.29□□□□□ -1.24
RNF40-202ENST00000357890 ACANP16112 2415 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 STHQ8IWL8 128 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 TRGV2A0A075B6R0 118 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 ENHOQ6UWT2 76 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 AMELXQ99217 191 aa7.29□□□□□ -1.24
RNF40-202ENST00000357890 Q8N2B8 174 aa7.28□□□□□ -1.24
RNF40-202ENST00000357890 OVOL2Q9BRP0 275 aa7.28□□□□□ -1.24
RNF40-202ENST00000357890 C9orf85Q96MD7 179 aa7.28□□□□□ -1.24
RNF40-202ENST00000357890 TRAV25A0A0B4J276 109 aa7.28□□□□□ -1.24
RNF40-202ENST00000357890 HIST2H2BCQ6DN03 193 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 HIST2H2BDQ6DRA6 164 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 C5orf38Q86SI9 138 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 TMEM86BQ8N661 226 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 INSP01308 110 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 ORMDL1Q9P0S3 153 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
RNF40-202ENST00000357890 HRNRQ86YZ3 2850 aaPredicted RBP7.26□□□□□ -1.25
RNF40-202ENST00000357890 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
RNF40-202ENST00000357890 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
RNF40-202ENST00000357890 HILS1P60008 231 aa7.26□□□□□ -1.25
RNF40-202ENST00000357890 MRPS36P82909 103 aaKnown RBP7.26□□□□□ -1.25
RNF40-202ENST00000357890 NDUFA1O15239 70 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 CLPSL2Q6UWE3 100 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 CXCL5P42830 114 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
RNF40-202ENST00000357890 PRB2P02812 416 aaPredicted RBP7.24□□□□□ -1.25
RNF40-202ENST00000357890 Q9UF83 564 aa7.24□□□□□ -1.25
RNF40-202ENST00000357890 FLNBO75369 2602 aaKnown RBP7.24□□□□□ -1.25
RNF40-202ENST00000357890 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
RNF40-202ENST00000357890 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 TRGV4A0A0C4DH28 118 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 COX6A2Q02221 97 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 A0A087WYN8 130 aa7.23□□□□□ -1.25
RNF40-202ENST00000357890 CRYGAP11844 174 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 DAD1P61803 113 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 C18orf65Q6ZTR6 163 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 PLA2G2AP14555 144 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 SCXQ7RTU7 201 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 UBE2D4Q9Y2X8 147 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 H0YGX0 51 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 FAM19A1Q7Z5A9 133 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 COX7B2Q8TF08 81 aa7.22□□□□□ -1.25
RNF40-202ENST00000357890 SMIM11BQ8TCY0 68 aa7.21□□□□□ -1.25
RNF40-202ENST00000357890 FLNCQ14315 2725 aa7.21□□□□□ -1.25
RNF40-202ENST00000357890 RPL35AP18077 110 aaKnown RBP7.21□□□□□ -1.26
RNF40-202ENST00000357890 Q6YL49 198 aa7.21□□□□□ -1.26
RNF40-202ENST00000357890 LITAFQ99732 161 aa7.21□□□□□ -1.26
RNF40-202ENST00000357890 PYGO1Q9Y3Y4 419 aa7.21□□□□□ -1.26
RNF40-202ENST00000357890 XCL1P47992 114 aa7.2□□□□□ -1.26
RNF40-202ENST00000357890 USP24Q9UPU5 2620 aa7.2□□□□□ -1.26
RNF40-202ENST00000357890 ZNF702PQ9H963 129 aa7.2□□□□□ -1.26
RNF40-202ENST00000357890 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
RNF40-202ENST00000357890 TIMM17BO60830 172 aa7.19□□□□□ -1.26
RNF40-202ENST00000357890 Q6ZSN1 163 aa7.19□□□□□ -1.26
RNF40-202ENST00000357890 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
RNF40-202ENST00000357890 Q6JHZ5 121 aa7.19□□□□□ -1.26
RNF40-202ENST00000357890 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
RNF40-202ENST00000357890 LINC00242Q5T6M2 205 aa7.18□□□□□ -1.26
RNF40-202ENST00000357890 Q96MF0 132 aa7.18□□□□□ -1.26
RNF40-202ENST00000357890 A0A096LPF7 62 aa7.18□□□□□ -1.26
RNF40-202ENST00000357890 IGHV4-31P0DP07 118 aa7.18□□□□□ -1.26
RNF40-202ENST00000357890 NDUFC2O95298 119 aa7.17□□□□□ -1.26
RNF40-202ENST00000357890 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
RNF40-202ENST00000357890 Q6ZTI0 123 aa7.17□□□□□ -1.26
RNF40-202ENST00000357890 ITPR1Q14643 2758 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 DEFB130BP0DP73 79 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 DEFB130AP0DP74 79 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
RNF40-202ENST00000357890 DEFB113Q30KQ7 82 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms