RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 K7EQG2 157 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 ASPHD1Q5U4P2 390 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 Q8N976 141 aa4.92□□□□□ -1.62
VPS13B-202ENST00000357162 ZNF73O43830 326 aaPredicted RBP4.91□□□□□ -1.62
VPS13B-202ENST00000357162 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 SIRPDQ9H106 197 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 LY6LH3BQJ8 138 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 RPL37AP8A6NKH3 93 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 NF1P21359 2839 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 M0R378 163 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 PRR31Q5SQ13 230 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 LINC00467Q9BRT7 94 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 A6NED7 52 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
VPS13B-202ENST00000357162 CCDC179H3BU77 68 aa4.9□□□□□ -1.62
VPS13B-202ENST00000357162 PSMG3-AS1Q96PY0 264 aa4.9□□□□□ -1.62
VPS13B-202ENST00000357162 LINC01548A6NM66 108 aa4.9□□□□□ -1.62
VPS13B-202ENST00000357162 AMELXQ99217 191 aa4.9□□□□□ -1.62
VPS13B-202ENST00000357162 FAM30AQ9NZY2 134 aa4.9□□□□□ -1.63
VPS13B-202ENST00000357162 IGKV2D-24A0A075B6R9 120 aa4.9□□□□□ -1.63
VPS13B-202ENST00000357162 COL27A1Q8IZC6 1860 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-202ENST00000357162 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.63
VPS13B-202ENST00000357162 A0A1B0GUV1 79 aa4.9□□□□□ -1.63
VPS13B-202ENST00000357162 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 TRBV6-8A0A0A6YYG3 113 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 TP53AIP1Q9HCN2 124 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 CHD7Q9P2D1 2997 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 VPREB1P12018 145 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 ESRGQ1W209 222 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 Q8N814 137 aa4.89□□□□□ -1.63
VPS13B-202ENST00000357162 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
VPS13B-202ENST00000357162 DEFB114Q30KQ6 69 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-202ENST00000357162 Q8N6K4 173 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 ESM1Q9NQ30 184 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 RS1O15537 224 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 TSHBP01222 138 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 CRIP1P50238 77 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 Q8N7P7 452 aa4.88□□□□□ -1.63
VPS13B-202ENST00000357162 FAM19A5Q7Z5A7 132 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-202ENST00000357162 CRIP2P52943 208 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-202ENST00000357162 IGKV4-1P06312 121 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 REG3AQ06141 175 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 Q6ZPA2 131 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 FRMD6-AS1P0C7T7 363 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 SEM1Q6ZVN7 128 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 DIAPH2-AS1Q14236 149 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 Q9HAA7 133 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 C3orf56Q8N813 242 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 PRAC2D3DTV9 90 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 TMEM254Q8TBM7 123 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 CELA1Q9UNI1 258 aa4.87□□□□□ -1.63
VPS13B-202ENST00000357162 A6NDX4 124 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 CHCHD10Q8WYQ3 142 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-202ENST00000357162 KLK5Q9Y337 293 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-202ENST00000357162 CLPSL1A2RUU4 121 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 RNASE3P12724 160 aaKnown RBP4.86□□□□□ -1.63
VPS13B-202ENST00000357162 RUSC1-AS1Q66K80 236 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 CDIP1Q9H305 208 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 EGFEM1PQ0D2K5 195 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 BEAN1Q3B7T3 259 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 LINC00694P0DN24 101 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 SBSPONQ8IVN8 264 aa4.86□□□□□ -1.63
VPS13B-202ENST00000357162 H0Y9J4 135 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 HIGD2AQ9BW72 106 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 E7EUB6 86 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 MAP6D1Q9H9H5 199 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 PRYO14603 147 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 POM121L12Q8N7R1 296 aa4.85□□□□□ -1.63
VPS13B-202ENST00000357162 PRB3Q04118 309 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-202ENST00000357162 LELP1Q5T871 98 aa4.84□□□□□ -1.63
VPS13B-202ENST00000357162 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
VPS13B-202ENST00000357162 C2orf48Q96LS8 159 aa4.84□□□□□ -1.63
VPS13B-202ENST00000357162 Q6ZQY7 126 aa4.84□□□□□ -1.63
VPS13B-202ENST00000357162 RITA1Q96K30 269 aa4.84□□□□□ -1.63
VPS13B-202ENST00000357162 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.64
VPS13B-202ENST00000357162 NCR3O14931 201 aa4.84□□□□□ -1.64
VPS13B-202ENST00000357162 CRYGDP07320 174 aa4.84□□□□□ -1.64
VPS13B-202ENST00000357162 APRG1Q8IVJ8 170 aa4.84□□□□□ -1.64
VPS13B-202ENST00000357162 UNQ9165/PRO28630Q6UXU0 137 aa4.84□□□□□ -1.64
VPS13B-202ENST00000357162 C10orf142B7Z368 130 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 IGLV2-18A0A075B6J9 118 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 IGHV4-59P01825 116 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 IGLV5-45A0A087WSX0 123 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 PRO0461Q9UI25 63 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 LOC110117498A0A087WWA1 95 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 SLURP1P55000 103 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 SMAD5-AS1Q9Y6J3 95 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 Q6ZQT7 251 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 DCANP1Q8TF63 244 aa4.83□□□□□ -1.64
VPS13B-202ENST00000357162 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms