RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 COX7CP15954 63 aa11.81□□□□□ -0.52
RXRA-201ENST00000356384 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 PRR14LQ5THK1 2151 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 LY6G6DO95868 133 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 UBE2D2P62837 147 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 Q6ZS46 218 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 LY6G6CO95867 125 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 PRR9Q5T870 116 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 RETNQ9HD89 108 aa11.8□□□□□ -0.52
RXRA-201ENST00000356384 ANKHD1Q8IWZ3 2542 aaKnown RBP11.79□□□□□ -0.52
RXRA-201ENST00000356384 C18orf65Q6ZTR6 163 aa11.79□□□□□ -0.52
RXRA-201ENST00000356384 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
RXRA-201ENST00000356384 C2orf91Q6ZV80 131 aa11.78□□□□□ -0.52
RXRA-201ENST00000356384 Q6ZVQ6 151 aa11.78□□□□□ -0.52
RXRA-201ENST00000356384 ABCA2Q9BZC7 2435 aa11.78□□□□□ -0.52
RXRA-201ENST00000356384 ZNF702PQ9H963 129 aa11.77□□□□□ -0.52
RXRA-201ENST00000356384 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.52
RXRA-201ENST00000356384 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
RXRA-201ENST00000356384 Q6Q795 121 aa11.76□□□□□ -0.53
RXRA-201ENST00000356384 PSMG3-AS1Q96PY0 264 aa11.76□□□□□ -0.53
RXRA-201ENST00000356384 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
RXRA-201ENST00000356384 XGP55808 180 aa11.76□□□□□ -0.53
RXRA-201ENST00000356384 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
RXRA-201ENST00000356384 CCDC168Q8NDH2 2452 aa11.75□□□□□ -0.53
RXRA-201ENST00000356384 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
RXRA-201ENST00000356384 COX17Q14061 63 aa11.75□□□□□ -0.53
RXRA-201ENST00000356384 CRIP3Q6Q6R5 217 aa11.75□□□□□ -0.53
RXRA-201ENST00000356384 GAS8-AS1O95177 125 aa11.74□□□□□ -0.53
RXRA-201ENST00000356384 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
RXRA-201ENST00000356384 MED12LQ86YW9 2145 aa11.74□□□□□ -0.53
RXRA-201ENST00000356384 CYSRT1A8MQ03 144 aa11.74□□□□□ -0.53
RXRA-201ENST00000356384 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
RXRA-201ENST00000356384 LINC01006Q8NI28 216 aa11.74□□□□□ -0.53
RXRA-201ENST00000356384 FSTL3O95633 263 aa11.73□□□□□ -0.53
RXRA-201ENST00000356384 ESRGQ1W209 222 aa11.73□□□□□ -0.53
RXRA-201ENST00000356384 Q6JHZ5 121 aa11.73□□□□□ -0.53
RXRA-201ENST00000356384 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
RXRA-201ENST00000356384 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
RXRA-201ENST00000356384 KLLNB2CW77 178 aa11.73□□□□□ -0.53
RXRA-201ENST00000356384 NTM-AS1Q6ZSK4 140 aa11.72□□□□□ -0.53
RXRA-201ENST00000356384 Q8IZM0 81 aa11.72□□□□□ -0.53
RXRA-201ENST00000356384 C11orf71Q6IPW1 123 aa11.71□□□□□ -0.53
RXRA-201ENST00000356384 LINC00208Q96KT6 92 aa11.71□□□□□ -0.53
RXRA-201ENST00000356384 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
RXRA-201ENST00000356384 MRGPRG-AS1Q2M3A8 158 aa11.71□□□□□ -0.53
RXRA-201ENST00000356384 LINC00694P0DN24 101 aa11.71□□□□□ -0.54
RXRA-201ENST00000356384 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.54
RXRA-201ENST00000356384 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.54
RXRA-201ENST00000356384 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.54
RXRA-201ENST00000356384 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
RXRA-201ENST00000356384 M0QXV9 152 aa11.69□□□□□ -0.54
RXRA-201ENST00000356384 SMIM26A0A096LP01 95 aa11.69□□□□□ -0.54
RXRA-201ENST00000356384 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
RXRA-201ENST00000356384 CIRBP-AS1Q8TBR5 109 aa11.69□□□□□ -0.54
RXRA-201ENST00000356384 X6R8D5 127 aa11.69□□□□□ -0.54
RXRA-201ENST00000356384 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
RXRA-201ENST00000356384 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
RXRA-201ENST00000356384 SMR3AQ99954 134 aa11.68□□□□□ -0.54
RXRA-201ENST00000356384 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
RXRA-201ENST00000356384 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
RXRA-201ENST00000356384 TRBV7-6A0A0J9YX20 115 aa11.67□□□□□ -0.54
RXRA-201ENST00000356384 Q8N6K4 173 aa11.67□□□□□ -0.54
RXRA-201ENST00000356384 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
RXRA-201ENST00000356384 A0A087WVE0 104 aa11.66□□□□□ -0.54
RXRA-201ENST00000356384 TRAV7A0A075B6U4 112 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 PMAIP1Q13794 54 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 NAV2Q8IVL1 2488 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 TRBV10-3A0A0K0K1G6 114 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
RXRA-201ENST00000356384 OXLD1Q5BKU9 147 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.54
RXRA-201ENST00000356384 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
RXRA-201ENST00000356384 Q8N814 137 aa11.64□□□□□ -0.55
RXRA-201ENST00000356384 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
RXRA-201ENST00000356384 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
RXRA-201ENST00000356384 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
RXRA-201ENST00000356384 CRIP2P52943 208 aaPredicted RBP11.63□□□□□ -0.55
RXRA-201ENST00000356384 REG3GQ6UW15 175 aa11.63□□□□□ -0.55
RXRA-201ENST00000356384 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
RXRA-201ENST00000356384 PCDH15Q96QU1 1955 aa11.63□□□□□ -0.55
RXRA-201ENST00000356384 IGIPA6NJ69 53 aa11.63□□□□□ -0.55
RXRA-201ENST00000356384 PCOTHQ58A44 107 aa11.63□□□□□ -0.55
RXRA-201ENST00000356384 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
RXRA-201ENST00000356384 SPINK1P00995 79 aa11.62□□□□□ -0.55
RXRA-201ENST00000356384 LINC01547P58512 204 aaPredicted RBP11.62□□□□□ -0.55
RXRA-201ENST00000356384 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
RXRA-201ENST00000356384 CEP192Q8TEP8 1941 aa11.62□□□□□ -0.55
RXRA-201ENST00000356384 A0A087WYN8 130 aa11.61□□□□□ -0.55
RXRA-201ENST00000356384 KIAA1549Q9HCM3 1950 aa11.61□□□□□ -0.55
RXRA-201ENST00000356384 DSCAMO60469 2012 aa11.61□□□□□ -0.55
RXRA-201ENST00000356384 EDN2P20800 178 aa11.6□□□□□ -0.55
RXRA-201ENST00000356384 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
RXRA-201ENST00000356384 PRYO14603 147 aa11.6□□□□□ -0.55
RXRA-201ENST00000356384 PRRC2AP48634 2157 aaKnown RBP11.6□□□□□ -0.55
RXRA-201ENST00000356384 COX6A2Q02221 97 aa11.6□□□□□ -0.55
RXRA-201ENST00000356384 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
RXRA-201ENST00000356384 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
RXRA-201ENST00000356384 PSPHP1O15172 72 aa11.57□□□□□ -0.56
RXRA-201ENST00000356384 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms