RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 A6NJY4 79 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 RBX1P62877 108 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 RPL32P62910 135 aaKnown RBP7.82□□□□□ -1.16
SVIP-201ENST00000354193 SBSPONQ8IVN8 264 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 OVOL2Q9BRP0 275 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 FABP2P12104 132 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 OR13C6PQ8NH95 151 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 HERVK_113P63121 156 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 SEC11AP67812 179 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 COX6A2Q02221 97 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
SVIP-201ENST00000354193 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 KPRPQ5T749 579 aaPredicted RBP7.81□□□□□ -1.16
SVIP-201ENST00000354193 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
SVIP-201ENST00000354193 CKS1BP61024 79 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 PIK3CD-AS1Q5SR53 167 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 CFAP161Q6P656 301 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 NPSP0C0P6 89 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 SPCS1Q9Y6A9 102 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 CEND1Q8N111 149 aa7.8□□□□□ -1.16
SVIP-201ENST00000354193 UFSP1Q6NVU6 142 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 COX11Q9Y6N1 276 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 Q8NAQ8 132 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
SVIP-201ENST00000354193 LINC00242Q5T6M2 205 aa7.78□□□□□ -1.16
SVIP-201ENST00000354193 LEPROTO15243 131 aa7.78□□□□□ -1.16
SVIP-201ENST00000354193 IGKV2D-24A0A075B6R9 120 aa7.78□□□□□ -1.16
SVIP-201ENST00000354193 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
SVIP-201ENST00000354193 TMEM223A0PJW6 202 aa7.77□□□□□ -1.16
SVIP-201ENST00000354193 C12orf74Q32Q52 190 aa7.77□□□□□ -1.16
SVIP-201ENST00000354193 PYGO1Q9Y3Y4 419 aa7.77□□□□□ -1.16
SVIP-201ENST00000354193 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
SVIP-201ENST00000354193 MUSTN1Q8IVN3 82 aa7.77□□□□□ -1.17
SVIP-201ENST00000354193 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
SVIP-201ENST00000354193 A4D1N5 150 aa7.77□□□□□ -1.17
SVIP-201ENST00000354193 UBE2D1P51668 147 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 LINC01546A6NGU7 62 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 REG3AQ06141 175 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 DLEU1O43261 78 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 SPATA25Q9BR10 227 aa7.76□□□□□ -1.17
SVIP-201ENST00000354193 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
SVIP-201ENST00000354193 NFE4Q86UQ8 179 aa7.75□□□□□ -1.17
SVIP-201ENST00000354193 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
SVIP-201ENST00000354193 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
SVIP-201ENST00000354193 SIVA1O15304 175 aa7.74□□□□□ -1.17
SVIP-201ENST00000354193 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
SVIP-201ENST00000354193 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
SVIP-201ENST00000354193 AMELXQ99217 191 aa7.74□□□□□ -1.17
SVIP-201ENST00000354193 CHCHD10Q8WYQ3 142 aaPredicted RBP7.74□□□□□ -1.17
SVIP-201ENST00000354193 WFDC10BQ8IUB3 73 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 IL17DQ8TAD2 202 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 PTH2Q96A98 100 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 C10orf126Q8N4M7 172 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 LINC00959A0A1B0GUT2 108 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 COX7A2LO14548 114 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 LECT2O14960 151 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 ERG28Q9UKR5 140 aa7.73□□□□□ -1.17
SVIP-201ENST00000354193 GAGE12HA6NDE8 117 aa7.72□□□□□ -1.17
SVIP-201ENST00000354193 K7EIL1 84 aa7.72□□□□□ -1.17
SVIP-201ENST00000354193 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
SVIP-201ENST00000354193 A0A1B0GV72 72 aa7.71□□□□□ -1.17
SVIP-201ENST00000354193 H3BMG7 143 aa7.71□□□□□ -1.17
SVIP-201ENST00000354193 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 TENM2Q9NT68 2774 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 TEX48A0A1B0GUV7 120 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 HIGD1BQ9P298 99 aa7.71□□□□□ -1.18
SVIP-201ENST00000354193 CCL18P55774 89 aa7.7□□□□□ -1.18
SVIP-201ENST00000354193 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
SVIP-201ENST00000354193 UBE2V1Q13404 147 aa7.7□□□□□ -1.18
SVIP-201ENST00000354193 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
SVIP-201ENST00000354193 ADAMTSL4-AS1Q5T5F5 129 aa7.69□□□□□ -1.18
SVIP-201ENST00000354193 PRO1854Q9UHT4 67 aa7.69□□□□□ -1.18
SVIP-201ENST00000354193 PSCAO43653 123 aa7.69□□□□□ -1.18
SVIP-201ENST00000354193 C9orf116Q5BN46 136 aaPredicted RBP7.69□□□□□ -1.18
SVIP-201ENST00000354193 COX6CP09669 75 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 TIRAPP58753 221 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 LELP1Q5T871 98 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 ZFAND6Q6FIF0 208 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 MRPL52Q86TS9 123 aaKnown RBP7.68□□□□□ -1.18
SVIP-201ENST00000354193 A0A1B0GWB2 263 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 A0A1W2PPM0 123 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 SPAG11BQ08648 103 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 DPH3Q96FX2 82 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 EDA2RQ9HAV5 297 aa7.68□□□□□ -1.18
SVIP-201ENST00000354193 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
SVIP-201ENST00000354193 ESRGQ1W209 222 aa7.67□□□□□ -1.18
SVIP-201ENST00000354193 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
SVIP-201ENST00000354193 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
SVIP-201ENST00000354193 TAL2Q16559 108 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 SH2D6Q7Z4S9 175 aa7.66□□□□□ -1.18
SVIP-201ENST00000354193 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms