RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 LINC00242Q5T6M2 205 aa16.8■□□□□ 0.28
USP25-203ENST00000351097 IGLV5-39A0A0G2JS06 123 aa16.79■□□□□ 0.28
USP25-203ENST00000351097 FAM19A3Q7Z5A8 133 aa16.79■□□□□ 0.28
USP25-203ENST00000351097 ICOSQ9Y6W8 199 aa16.79■□□□□ 0.28
USP25-203ENST00000351097 NTM-AS1Q6ZSK4 140 aa16.78■□□□□ 0.28
USP25-203ENST00000351097 C16orf74Q96GX8 76 aa16.78■□□□□ 0.28
USP25-203ENST00000351097 NOP10Q9NPE3 64 aaKnown RBP16.78■□□□□ 0.28
USP25-203ENST00000351097 ATRQ13535 2644 aa16.77■□□□□ 0.27
USP25-203ENST00000351097 CIRBPQ14011 172 aaKnown RBP16.77■□□□□ 0.27
USP25-203ENST00000351097 NOTCH3Q9UM47 2321 aa16.76■□□□□ 0.27
USP25-203ENST00000351097 LINC01600Q96MT4 127 aa16.76■□□□□ 0.27
USP25-203ENST00000351097 GAGE12JA6NER3 117 aa16.75■□□□□ 0.27
USP25-203ENST00000351097 GAGE4Q13068 117 aa16.75■□□□□ 0.27
USP25-203ENST00000351097 GAGE5Q13069 117 aa16.75■□□□□ 0.27
USP25-203ENST00000351097 TEP1Q99973 2627 aaKnown RBP16.75■□□□□ 0.27
USP25-203ENST00000351097 COX6CP09669 75 aa16.75■□□□□ 0.27
USP25-203ENST00000351097 Q9H8V8 135 aa16.75■□□□□ 0.27
USP25-203ENST00000351097 DAND5Q8N907 189 aa16.74■□□□□ 0.27
USP25-203ENST00000351097 TRBV10-2A0A0K0K1G8 114 aa16.74■□□□□ 0.27
USP25-203ENST00000351097 TRAV13-1A0A0B4J241 112 aa16.73■□□□□ 0.27
USP25-203ENST00000351097 SMIM1B2RUZ4 78 aa16.73■□□□□ 0.27
USP25-203ENST00000351097 CDC42SE2Q9NRR3 84 aa16.73■□□□□ 0.27
USP25-203ENST00000351097 TMEM262E9PQX1 116 aa16.72■□□□□ 0.27
USP25-203ENST00000351097 TRRAPQ9Y4A5 3859 aa16.72■□□□□ 0.27
USP25-203ENST00000351097 RPL13AP40429 203 aaKnown RBP16.72■□□□□ 0.27
USP25-203ENST00000351097 XGP55808 180 aa16.71■□□□□ 0.27
USP25-203ENST00000351097 MT-ATP8P03928 68 aa16.71■□□□□ 0.27
USP25-203ENST00000351097 NTN5Q8WTR8 489 aaPredicted RBP16.71■□□□□ 0.27
USP25-203ENST00000351097 OVOL2Q9BRP0 275 aa16.71■□□□□ 0.27
USP25-203ENST00000351097 WFDC9Q8NEX5 89 aa16.7■□□□□ 0.26
USP25-203ENST00000351097 LINC00308Q8TCZ7 52 aa16.7■□□□□ 0.26
USP25-203ENST00000351097 TMEM243Q9BU79 118 aa16.7■□□□□ 0.26
USP25-203ENST00000351097 TRGV2A0A075B6R0 118 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 UBE2L6O14933 153 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 GAGE7O76087 117 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 GAGE12FP0CL80 117 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 GAGE12GP0CL81 117 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 GAGE12IP0CL82 117 aa16.68■□□□□ 0.26
USP25-203ENST00000351097 F5H768 121 aa16.67■□□□□ 0.26
USP25-203ENST00000351097 COPS9Q8WXC6 57 aa16.67■□□□□ 0.26
USP25-203ENST00000351097 ZNF625Q96I27 306 aaPredicted RBP16.67■□□□□ 0.26
USP25-203ENST00000351097 CIDEAO60543 219 aa16.67■□□□□ 0.26
USP25-203ENST00000351097 TRBV6-4A0A1B0GX49 114 aa16.66■□□□□ 0.26
USP25-203ENST00000351097 A0A1B0GV72 72 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 LST1O00453 97 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 C2orf82Q6UX34 121 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 PRIMA1Q86XR5 153 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 CLEC2BQ92478 149 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 H7C423 109 aa16.65■□□□□ 0.26
USP25-203ENST00000351097 H3BT86 120 aa16.64■□□□□ 0.25
USP25-203ENST00000351097 KRTAP24-1Q3LI83 254 aa16.64■□□□□ 0.25
USP25-203ENST00000351097 A0A0U1RRA0 63 aa16.63■□□□□ 0.25
USP25-203ENST00000351097 HERV-K104P63124 156 aa16.63■□□□□ 0.25
USP25-203ENST00000351097 LOC100131303A0A0U1RQF7 123 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 TEX49A0A1B0GTD5 131 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 WIPF1O43516 503 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 MEIG1Q5JSS6 88 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 UBE2WQ96B02 151 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 X6R8D5 127 aa16.62■□□□□ 0.25
USP25-203ENST00000351097 TRGV4A0A0C4DH28 118 aa16.61■□□□□ 0.25
USP25-203ENST00000351097 SOSTDC1Q6X4U4 206 aa16.61■□□□□ 0.25
USP25-203ENST00000351097 CKS1BP61024 79 aa16.6■□□□□ 0.25
USP25-203ENST00000351097 CYSRT1A8MQ03 144 aa16.6■□□□□ 0.25
USP25-203ENST00000351097 KIR2DL5BQ8NHK3 375 aa16.58■□□□□ 0.25
USP25-203ENST00000351097 SMIM9A6NGZ8 99 aa16.57■□□□□ 0.24
USP25-203ENST00000351097 PPDPFQ9H3Y8 114 aa16.57■□□□□ 0.24
USP25-203ENST00000351097 GAGE6Q13070 117 aa16.56■□□□□ 0.24
USP25-203ENST00000351097 FHL2Q14192 279 aa16.56■□□□□ 0.24
USP25-203ENST00000351097 TRAV8-4A0A0B4J246 113 aa16.55■□□□□ 0.24
USP25-203ENST00000351097 LINC00612Q8N6U2 182 aa16.55■□□□□ 0.24
USP25-203ENST00000351097 APOC4P55056 127 aa16.55■□□□□ 0.24
USP25-203ENST00000351097 DEFB135Q30KP9 77 aa16.55■□□□□ 0.24
USP25-203ENST00000351097 TRBV6-8A0A0A6YYG3 113 aa16.54■□□□□ 0.24
USP25-203ENST00000351097 DEFB130BP0DP73 79 aa16.54■□□□□ 0.24
USP25-203ENST00000351097 DEFB130AP0DP74 79 aa16.54■□□□□ 0.24
USP25-203ENST00000351097 COX7A2LO14548 114 aa16.54■□□□□ 0.24
USP25-203ENST00000351097 SHISA2Q6UWI4 295 aa16.54■□□□□ 0.24
USP25-203ENST00000351097 FBN1P35555 2871 aaKnown RBP16.53■□□□□ 0.24
USP25-203ENST00000351097 COX7B2Q8TF08 81 aa16.53■□□□□ 0.24
USP25-203ENST00000351097 BAHCC1Q9P281 2608 aa16.52■□□□□ 0.24
USP25-203ENST00000351097 NBEAL2Q6ZNJ1 2754 aa16.5■□□□□ 0.23
USP25-203ENST00000351097 IGLV4-60A0A075B6I1 120 aa16.5■□□□□ 0.23
USP25-203ENST00000351097 CHCHD5Q9BSY4 110 aa16.5■□□□□ 0.23
USP25-203ENST00000351097 IGHV4-30-4P0DP06 118 aa16.5■□□□□ 0.23
USP25-203ENST00000351097 IGKV3OR2-268A0A0C4DH90 116 aa16.49■□□□□ 0.23
USP25-203ENST00000351097 OXLD1Q5BKU9 147 aa16.49■□□□□ 0.23
USP25-203ENST00000351097 DEFB121Q5J5C9 76 aa16.49■□□□□ 0.23
USP25-203ENST00000351097 SNCGO76070 127 aa16.48■□□□□ 0.23
USP25-203ENST00000351097 C3orf56Q8N813 242 aa16.48■□□□□ 0.23
USP25-203ENST00000351097 FAM222AQ5U5X8 452 aa16.47■□□□□ 0.23
USP25-203ENST00000351097 TOMM7Q9P0U1 55 aa16.47■□□□□ 0.23
USP25-203ENST00000351097 IGHV3OR16-9A0A0B4J2B5 98 aa16.46■□□□□ 0.23
USP25-203ENST00000351097 DEFB4AO15263 64 aa16.45■□□□□ 0.22
USP25-203ENST00000351097 MIR7-3HGQ8N6C7 128 aa16.45■□□□□ 0.22
USP25-203ENST00000351097 IGHV4-28A0A0C4DH34 117 aa16.44■□□□□ 0.22
USP25-203ENST00000351097 LYRM9A8MSI8 78 aa16.44■□□□□ 0.22
USP25-203ENST00000351097 TRAV13-2A0A0B4J235 113 aa16.44■□□□□ 0.22
USP25-203ENST00000351097 FAM240AA0A1B0GVK7 77 aa16.44■□□□□ 0.22
USP25-203ENST00000351097 KRTAP10-11P60412 298 aa16.43■□□□□ 0.22
USP25-203ENST00000351097 A0A087WZ39 114 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms