RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 SOSTDC1Q6X4U4 206 aa11.78□□□□□ -0.52
PDAP1-201ENST00000350498 UBE2WQ96B02 151 aa11.78□□□□□ -0.52
PDAP1-201ENST00000350498 TMEM262E9PQX1 116 aa11.78□□□□□ -0.52
PDAP1-201ENST00000350498 DNAJC30Q96LL9 226 aa11.78□□□□□ -0.52
PDAP1-201ENST00000350498 K7EQD1 137 aa11.77□□□□□ -0.53
PDAP1-201ENST00000350498 IGLV1-51P01701 117 aa11.77□□□□□ -0.53
PDAP1-201ENST00000350498 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
PDAP1-201ENST00000350498 ANAPC13Q9BS18 74 aa11.77□□□□□ -0.53
PDAP1-201ENST00000350498 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
PDAP1-201ENST00000350498 TRAV8-4A0A0B4J246 113 aa11.76□□□□□ -0.53
PDAP1-201ENST00000350498 NDUFA1O15239 70 aa11.76□□□□□ -0.53
PDAP1-201ENST00000350498 LINC00308Q8TCZ7 52 aa11.76□□□□□ -0.53
PDAP1-201ENST00000350498 M0QXV9 152 aa11.75□□□□□ -0.53
PDAP1-201ENST00000350498 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
PDAP1-201ENST00000350498 CSNK1G2-AS1Q8NCQ2 148 aa11.75□□□□□ -0.53
PDAP1-201ENST00000350498 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
PDAP1-201ENST00000350498 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
PDAP1-201ENST00000350498 LST1O00453 97 aa11.75□□□□□ -0.53
PDAP1-201ENST00000350498 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 SMIM1B2RUZ4 78 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 J3QKU1 62 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 SNCGO76070 127 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 COX6CP09669 75 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 RPL36AP83881 106 aaKnown RBP11.74□□□□□ -0.53
PDAP1-201ENST00000350498 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 RPL36ALQ969Q0 106 aaKnown RBP11.74□□□□□ -0.53
PDAP1-201ENST00000350498 TIRAPP58753 221 aa11.74□□□□□ -0.53
PDAP1-201ENST00000350498 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
PDAP1-201ENST00000350498 HILS1P60008 231 aa11.72□□□□□ -0.53
PDAP1-201ENST00000350498 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
PDAP1-201ENST00000350498 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
PDAP1-201ENST00000350498 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
PDAP1-201ENST00000350498 ATRQ13535 2644 aa11.72□□□□□ -0.53
PDAP1-201ENST00000350498 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
PDAP1-201ENST00000350498 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
PDAP1-201ENST00000350498 PRIMA1Q86XR5 153 aa11.71□□□□□ -0.53
PDAP1-201ENST00000350498 NSD1Q96L73 2696 aaPredicted RBP11.71□□□□□ -0.54
PDAP1-201ENST00000350498 HERVK_113P63121 156 aa11.7□□□□□ -0.54
PDAP1-201ENST00000350498 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
PDAP1-201ENST00000350498 TIMM17BO60830 172 aa11.69□□□□□ -0.54
PDAP1-201ENST00000350498 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
PDAP1-201ENST00000350498 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
PDAP1-201ENST00000350498 DAZ2Q13117 558 aaKnown RBP11.69□□□□□ -0.54
PDAP1-201ENST00000350498 GAGE6Q13070 117 aa11.68□□□□□ -0.54
PDAP1-201ENST00000350498 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
PDAP1-201ENST00000350498 F5H768 121 aa11.68□□□□□ -0.54
PDAP1-201ENST00000350498 IFITM1P13164 125 aa11.68□□□□□ -0.54
PDAP1-201ENST00000350498 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
PDAP1-201ENST00000350498 SS18L2Q9UHA2 77 aa11.68□□□□□ -0.54
PDAP1-201ENST00000350498 HIVEP1P15822 2718 aa11.68□□□□□ -0.54
PDAP1-201ENST00000350498 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 H3BT86 120 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 B5MCH6 92 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 LY6G6DO95868 133 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 DAZ4Q86SG3 579 aaKnown RBP11.67□□□□□ -0.54
PDAP1-201ENST00000350498 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 C16orf74Q96GX8 76 aa11.67□□□□□ -0.54
PDAP1-201ENST00000350498 DAZ3Q9NR90 486 aaKnown RBP11.67□□□□□ -0.54
PDAP1-201ENST00000350498 IGLV4-60A0A075B6I1 120 aa11.66□□□□□ -0.54
PDAP1-201ENST00000350498 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
PDAP1-201ENST00000350498 FAM218AQ96MZ4 157 aa11.66□□□□□ -0.54
PDAP1-201ENST00000350498 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
PDAP1-201ENST00000350498 FHL2Q14192 279 aa11.66□□□□□ -0.54
PDAP1-201ENST00000350498 DEFB4AO15263 64 aa11.65□□□□□ -0.54
PDAP1-201ENST00000350498 TOMM7Q9P0U1 55 aa11.65□□□□□ -0.54
PDAP1-201ENST00000350498 A0A096LPF7 62 aa11.64□□□□□ -0.55
PDAP1-201ENST00000350498 PF4P02776 101 aa11.64□□□□□ -0.55
PDAP1-201ENST00000350498 TMEM243Q9BU79 118 aa11.64□□□□□ -0.55
PDAP1-201ENST00000350498 UBE2L6O14933 153 aa11.63□□□□□ -0.55
PDAP1-201ENST00000350498 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
PDAP1-201ENST00000350498 COX7A2LO14548 114 aa11.62□□□□□ -0.55
PDAP1-201ENST00000350498 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
PDAP1-201ENST00000350498 Q9HAA7 133 aa11.62□□□□□ -0.55
PDAP1-201ENST00000350498 SHISA2Q6UWI4 295 aa11.62□□□□□ -0.55
PDAP1-201ENST00000350498 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
PDAP1-201ENST00000350498 CSDC2Q9Y534 153 aaKnown RBP11.61□□□□□ -0.55
PDAP1-201ENST00000350498 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
PDAP1-201ENST00000350498 C22orf24Q9Y442 160 aa11.6□□□□□ -0.55
PDAP1-201ENST00000350498 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
PDAP1-201ENST00000350498 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
PDAP1-201ENST00000350498 SMCR5Q8TEV8 140 aa11.59□□□□□ -0.55
PDAP1-201ENST00000350498 FAM19A3Q7Z5A8 133 aa11.59□□□□□ -0.55
PDAP1-201ENST00000350498 LINC00337Q8N6G1 96 aa11.59□□□□□ -0.55
PDAP1-201ENST00000350498 DEFB121Q5J5C9 76 aa11.58□□□□□ -0.56
PDAP1-201ENST00000350498 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
PDAP1-201ENST00000350498 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
PDAP1-201ENST00000350498 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
PDAP1-201ENST00000350498 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
PDAP1-201ENST00000350498 C3orf56Q8N813 242 aa11.58□□□□□ -0.56
PDAP1-201ENST00000350498 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
PDAP1-201ENST00000350498 X6R8D5 127 aa11.57□□□□□ -0.56
PDAP1-201ENST00000350498 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
PDAP1-201ENST00000350498 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
PDAP1-201ENST00000350498 BAALC-AS2P0C853 105 aa11.57□□□□□ -0.56
PDAP1-201ENST00000350498 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
PDAP1-201ENST00000350498 Q8N3U1 123 aa11.56□□□□□ -0.56
PDAP1-201ENST00000350498 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
PDAP1-201ENST00000350498 GYPEP15421 78 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms